| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1092 |
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| Symbol | |
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| ID | 3606479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 1588059 |
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| End bp | 1589897 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637687962 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_292285 |
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| Protein GI | 72382930 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATTGTA GAATTACTGA ACTTGTAAGT TCGAAAAAAG TTTTGACATC TCGTGATAAA
GATCAAGGAA AAAAGAAAAT CAAGAATGTT AAAACATACC CAGTTCCATT CACTTTGGAA
GAAAAAAAGA AAAATATTAC TTTTAATACA AACACGCCTT CTCAACCTTC TAAAGAACAA
ATAATCAATC AAGCAATTGA ATTTCATTCA CAAGGAAATA TTCCAGAAGC GGCAAAATAT
TATAAAAATT TCATCAATCA AGGATTCAAA GATGAGAGGG CTTTTTCTAA TTATGGAGTC
ATATTAAAAA GTCTTGGTAA ATTAAAAGAA GCAGAAATAT CAACTCGTAA AGCAATTGAA
ATTAAACCTG ATTTAGCAGA TTCATATTAT AATCTGGGGA TCATTTTAAA AGATCTTGGC
AAATTAAAAG AATCAGAAAC ATACACTCGC AAGGCTATTG AACTGAATCC TAATTACGCA
GAGGCTCATT CCATTTTAGG ACTAATATTG CGAGATCTTG GTAACTTACA AGAAGCAGAA
AGCTACACTC GCAAAGCTAT TGAAATTAAA CCTAATTACG CAGAAGCTTG TTCCAATTTA
GGACTAATAT TGAAAGATAG CGGCCAATTA CAAGAAGCAG AATTGTCATG TCGCAAAGCG
ATTGAAATTA ATCCTAATTT CGCTGATGCG TATTCCAACC TGGGAGGTAT ATTGAGCGAT
CTTGGCAAAT TAAAAGAAGC AGAGCTATCA GCTCGCAAAG CCATTGCAAT TAAACCTAAT
TACGCAGAAG CTTGTTCAAA TTTAGGAATA ATATTGAAAG ATCTTGGTAA CTTGCAAGAA
GCAGAAAGCT ACACTCGCAA AGCTATTGAA ATTAAGCCAA ATTTCGCAGA GGCTCTTTAT
AGCCTGGGAA GCTTATTGAT AGATCTTGAT AAACGAGAAG AAGCAATGAA AAGCTTGTTA
AAGGCAGTTG AATTAAAACC TGCATTAGAT AAGGCAGTTA GAGACTTAGC CATTAATTTA
AATTATGAAA AAAAATTTGA ATTAGCTTTA AAATATCTAA GCAAAAATGA ATCTATTTCT
TGTCAAAGCC TATATCTAGG CTGTCTATTA TCTCTAGATC GAGAAAAAGA GTTTAATGAA
AAATATCAAG AACTATCTAA AAAGAGAGTC TGTAATGCTG AGATTGGAGG CATAATTGAG
CATGCCAGTA TTATTTACGA AAAAAAATAT CATTCACCTT TCTGTAATCA AGCCATGAAA
TATGTCTTGT TTGAAAAAAT AAATGAAGAA TCATTCTCCA CAAATGATCT AAACAAAATG
ATTTCTTATA TAAAAAACGA AAAAACTATG ATGAGGTATC AAGGTACTCT TCATAAAGGA
ATTCAAACTT CTGGAAATTT ATTTTCATTA GATCTTCCAT TTGTTAGGTC AATTAAAAAA
GCCTTAGAAG AAAAGATTGA ACTTTACAGA AATAAATTTA AAGATAGTGG GCAAGGCTTC
ATCCTTAATT GGCCCGAAAA GTATGAACTT CGGTCATGGA TGATAAGTAT GAAAAACGGA
GGATTCCTGG CACCTCATAA TCATGAATAT GGATGGGTTA CTGGTAGTTT TTATCTACAG
ATTCCTAAAT ATAGTAATAA TGATAATCAT TCAGGTGATA TAGCTTTTAG TTATAAAGGT
CCTAGATATC CTAATAAAGG TAAGAATTTT AATTTAATGA TTAAGAAAAT AGAAATCAGA
GATATTTGTA TATTTCCTTC TTCTTTATTT CACCATACAA TTCCATTTGA AAGCACAGAA
GAACGGATAT GTTTTGTTTT TGATTTAATA CAGAAATAA
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| Protein sequence | MNCRITELVS SKKVLTSRDK DQGKKKIKNV KTYPVPFTLE EKKKNITFNT NTPSQPSKEQ
IINQAIEFHS QGNIPEAAKY YKNFINQGFK DERAFSNYGV ILKSLGKLKE AEISTRKAIE
IKPDLADSYY NLGIILKDLG KLKESETYTR KAIELNPNYA EAHSILGLIL RDLGNLQEAE
SYTRKAIEIK PNYAEACSNL GLILKDSGQL QEAELSCRKA IEINPNFADA YSNLGGILSD
LGKLKEAELS ARKAIAIKPN YAEACSNLGI ILKDLGNLQE AESYTRKAIE IKPNFAEALY
SLGSLLIDLD KREEAMKSLL KAVELKPALD KAVRDLAINL NYEKKFELAL KYLSKNESIS
CQSLYLGCLL SLDREKEFNE KYQELSKKRV CNAEIGGIIE HASIIYEKKY HSPFCNQAMK
YVLFEKINEE SFSTNDLNKM ISYIKNEKTM MRYQGTLHKG IQTSGNLFSL DLPFVRSIKK
ALEEKIELYR NKFKDSGQGF ILNWPEKYEL RSWMISMKNG GFLAPHNHEY GWVTGSFYLQ
IPKYSNNDNH SGDIAFSYKG PRYPNKGKNF NLMIKKIEIR DICIFPSSLF HHTIPFESTE
ERICFVFDLI QK
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