Gene PMN2A_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0884 
Symbol 
ID3606268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1389861 
End bp1391084 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content36% 
IMG OID637687752 
Productglycosyltransferase 
Protein accessionYP_292078 
Protein GI72382723 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.287497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGTAA ATTCATCTTT AGATCTTCCA AGCAATATTG CATTAGTGCA TGAGTGGTTT 
ACTCCAAGAT CGACAGGAGG TGCTGAGAAT GTTGTTCAGG TAATTGATGA TTTGTTAACT
GAAATTGCAT CAAAGCCAGA ACTATTTTCT TTGGTTAATG AAGAGAGGTT AGAAAAAAAT
AGCTGGTTAT TTAATCGAAA AGTAAAAACT AGCTTTATTC AAAATTTACC ATTCGGGATT
TCACATGTTC AACAATATTT ACCACTTTTG CCTTTTGCGA TTGAGCAACT CGATTTTGAG
GGGTATCCAT TGATCTTAAG CAGTAATCAT CTTGTCGCTA AGGGTATTTT GACATCGCCT
GATCAACTTC ATATTAGTTA TGTCCATACA CCTGTTAGAT ACGCTTGGGA TCAAATGAAT
ATATATTTGA AAAGATCTTT TTTAAGAAGA ATTGGTTTAG GGCCGTTAAT TAGATGGCAA
TTGCATACTT TGAGGCAATG GGATCAATTA AGTAGCTCAA GAGTAGATTA CTTGCTGGCC
AATTCTAATT TTACGGCAAA AAGGATTTGG AAGTATTGGA GAAGGCGTTC AGAGGTGTTA
CATCCACCTG TAGATGTAAA TCGTTTTGAA TGGAATAGGC CTAGGGAAGA TTTCTATTTA
AGTGTCTGTA GATTGGTTCC TAATAAAAGG GTTGATTTAC TTGTTAGGGC TTTTAATAGG
CTCAAATTAC CTTTAATAAT TGTTGGCGAC GGAGTGGAAA AGGAATATTT AAAAAAACTT
GCAGGTCCAA CTGTTCAAAT TATTGGTTTT CAAAGCAAAG AGAAGATTGA AAGTCTAATG
AGCAGATGTA GAGCCTTTGT CTACGCTGGT ATTGAAGATT TTGGAATAGC TCCTGTGGAG
GCGATGGCCT CAGGTGCTCC TGTGATTGCT TTTGGTAAGG GAGGGGTTTT AGATACGGTT
AAATGTTTTC ATTCTGATTC TGACAAAGGA GCAACTGGCC TTTTGTTCCC TTCTCAGACA
GTAAAGTCCC TGGTTGAAGC AATCGAATTT TTCAAGCAAA AGCAACTTTG GAGAGATTTA
AAACCTGAGT TAATTAGAGA TTGGAGTAAT TCTTTTTCTC AAGATTCTTT TAAAGATAAA
TTTGCCAAAA CCATAAATAG AGCTTGGAGG GAACATGTCA ATTCTTGTGA CATTGCTACT
AGTGACCTTA CTTCTTCATC ATGA
 
Protein sequence
MSVNSSLDLP SNIALVHEWF TPRSTGGAEN VVQVIDDLLT EIASKPELFS LVNEERLEKN 
SWLFNRKVKT SFIQNLPFGI SHVQQYLPLL PFAIEQLDFE GYPLILSSNH LVAKGILTSP
DQLHISYVHT PVRYAWDQMN IYLKRSFLRR IGLGPLIRWQ LHTLRQWDQL SSSRVDYLLA
NSNFTAKRIW KYWRRRSEVL HPPVDVNRFE WNRPREDFYL SVCRLVPNKR VDLLVRAFNR
LKLPLIIVGD GVEKEYLKKL AGPTVQIIGF QSKEKIESLM SRCRAFVYAG IEDFGIAPVE
AMASGAPVIA FGKGGVLDTV KCFHSDSDKG ATGLLFPSQT VKSLVEAIEF FKQKQLWRDL
KPELIRDWSN SFSQDSFKDK FAKTINRAWR EHVNSCDIAT SDLTSSS