Gene PMN2A_0817 details

Gene Information

• Locus tag: PMN2A_0817
• ID: 3606197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1319613
• End bp: 1321598
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637687682
• Product: TPR repeat-containing protein
• Protein accession: YP_292011
• Protein GI: 72382656
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.975986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGAT CAGATAACAA GAAAAACAAA CAACTCTACA AGGTCTCAAC ATTCCCTGTT 
CCAGCTGATT TAGGGGCAGA TCATAGAAAT CTGACCCTTA ATACATATAC TCTTTCTCAA 
CCCTCAAAAG AAAAAATAAT TGATCAAGCA TTTAAGTTCC ATTCACAAGG AAACATTTCA 
AAGGCAGAAA AATATTATCA ACTTTTCATC AACCAAGGTT TGAAAGACTT CAGAGTTTTC 
TCTAATTATG GAGCAATTTT ACTAGATCTT GGTAAATTAA AAGAAGCAGA AATATTAACT 
CGCAAAGCAA TTGAACAAAA CCCTGATTTC GCAATAGCGC AATTCAATCT AGGAAAAATA 
CTACAAAATC TTGGCAGATC AAAAGAAGCA TTTGATTGTT ATGTAAAAGT AACTAAAATT 
GATCCAAAAT TTCCTAATAT TTACGAGACC ATAACAAGTT TTCTAGGAAA CTCAAATTCA 
TCTCTACTAA ATCACACTAA ACTTATAGAT ATTTTAAATC TTCTATTAGA AAGAAATGAC 
ATCACACATA ACGAATTATT TGCAGCATTT AACTTTTTAT ATAATGATAA AATAATCTCT 
CATTTAGAAA AACTTGATTC AGATTTATTT AAAGAGGAAT CATTTAAATT ATTTATTAAT 
GATAAACTTA TAATGAAAGC ACTTAAAAAA ATAACTTTTA AGGATCTTAG ATTGGAGAAA 
ATACTAACTA GGATAAGAAA ATATATATGC GAAGTGATTA GCAATAACAC AGAAGAAATA 
GATTACTCTG AATTACAATT TATTATTGCT TTAGGAGAAC AATGCTTCCT AAATGAATAT 
ATTTACTCAC TATCAGAAGA GGAAGATTCA TTTCTTAGTA CAATAATGAA TAGATGTATT 
AATGGCGAAA TAAGTGAAAC AAATATTTCA ATTCTATCTT GTTATTTTCC CTTATATAAA 
CTTCTTGATA AGTTGCCATC ATTAAATTCT TTTAATTCCT CTAATCAAAG CTTAAAAGAA 
CTTATCAAAT TACAAATATT AGAGCCCTTA GAAGAAATAG AATTGTCTAA AAGTATAAAA 
AAAATAGGTT TTATTTATGA TGATATTTCT CAAAAGGTGA AATCTCAATA CGAAGAAAAT 
CCATTTCCCA GATGGAGATA TGGAAGCAAC TTAGGAAGTC ATAAAGTCTC TATTAGTCAA 
GCAATTAACA ATGAAATTAA ACCTAACTTT ATAAGTCAAA ATTTAAGTGA TAGTAATTTA 
AAGGTTCTCA TTGCTGGATG TGGAACTGGT AATCAAATCT TACAAGCACA GAGATATAAA 
AATGCTCAGA TAACATGTAT CGACTTAAGT ATATCTAGTC TTTCTTACGC TCAAAGAAAA 
ATAAATGAAC TTAAAATTAA TAATGTTGAA TTAATTCAAA TGGATATTTT AGAGGTTTCT 
TTATTAAAGA CTAAATTCGA TATTATTGAA TGTGGTGGTG TTTTACATCA CATGAAAGAA 
CCTAATTTAG GGTTAGATTG TTTATTGGAT TGTATTGATA AAAATGGTTT TCTCAAGCTA 
GCTTTGTATA GCAGAATTGC GATCAAAGAT GTAATTGCTG CCGCCCAACA TATTGCCTCA 
AGGAATTTGG AACCTACTTT AGAAAATATT CATTTATTCA GAGAGGAAGT TTTTTCAGGC 
AAGTATCCTG GAAATAAAGA TTTTGTCAAC TTCAGGGATT TCTACTCTTC ATCCGAGTTT 
CGTGATTTTT TCTTTCATTA TCAAGCACAT TATATTTATC TAAGTCAACT CCAAGAAGTA 
TTGAAGACAA GATCCTTGAA ATTCTTAGGC TTTTTGCTAT CTCAATCGAC TAAATCTCTC 
TACAAAAACT ATTTCCCTGA AGATAAAAAA CAAACCAACT TAGATAACTG GGCAAAGTTT 
GAAGAGAAGC ATCCAAATAC TTTCAGAGGA ATGTATCAAT TCTGGGTTTG TAAAACTAAA 
AACTGA 

 

Protein sequence

MKRSDNKKNK QLYKVSTFPV PADLGADHRN LTLNTYTLSQ PSKEKIIDQA FKFHSQGNIS 
KAEKYYQLFI NQGLKDFRVF SNYGAILLDL GKLKEAEILT RKAIEQNPDF AIAQFNLGKI 
LQNLGRSKEA FDCYVKVTKI DPKFPNIYET ITSFLGNSNS SLLNHTKLID ILNLLLERND 
ITHNELFAAF NFLYNDKIIS HLEKLDSDLF KEESFKLFIN DKLIMKALKK ITFKDLRLEK 
ILTRIRKYIC EVISNNTEEI DYSELQFIIA LGEQCFLNEY IYSLSEEEDS FLSTIMNRCI 
NGEISETNIS ILSCYFPLYK LLDKLPSLNS FNSSNQSLKE LIKLQILEPL EEIELSKSIK 
KIGFIYDDIS QKVKSQYEEN PFPRWRYGSN LGSHKVSISQ AINNEIKPNF ISQNLSDSNL 
KVLIAGCGTG NQILQAQRYK NAQITCIDLS ISSLSYAQRK INELKINNVE LIQMDILEVS 
LLKTKFDIIE CGGVLHHMKE PNLGLDCLLD CIDKNGFLKL ALYSRIAIKD VIAAAQHIAS 
RNLEPTLENI HLFREEVFSG KYPGNKDFVN FRDFYSSSEF RDFFFHYQAH YIYLSQLQEV 
LKTRSLKFLG FLLSQSTKSL YKNYFPEDKK QTNLDNWAKF EEKHPNTFRG MYQFWVCKTK 
N