Gene PMN2A_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0796 
Symbol 
ID3606175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1299647 
End bp1301485 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content33% 
IMG OID637687660 
Producthypothetical protein 
Protein accessionYP_291990 
Protein GI72382635 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.886904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGTT TAACTAAATC TTTTTACCCA ACTTTAATAC AAAGAAGACG TGGTCTTCTT 
TGTATTTTAT TTATTGGATT AATAATTTTT GTTTGGCAAT TAGGGAAAAC AGGTTTGGTT
GATGAAACAC CACCTTTGTT TGCGGCAGCC AGTAGAGCAA TGGCAGAAAC GGGTAATTGG
TTTACTCCTC AAGTAAATGG ATTACCTCGA TTTGACAAGC CACCTTTGGT CTATTGGTTA
ATGGGACTGG GATTTTCGAT CCCAGGAAAT AATTCTTGGG ACCCTTTAGG TACATGGGCT
GCCAGGCTTC CTTCTGCATT ATCAACAATT TTTTTAATGC TTGTTTTAGG GGACACAATG
ATGAAATATC CCCAAGAAGA AAATAATTTC AATAGAAGGA CTGCAGTTAT TACTGCAGTG
GTATTTGCGT TGTCGCCTTT GGTAATAATT TGGGGAAGAA TTGCCGTAAG TGATGCACTC
CTTTGCAGCA CTCTTGGAAT TTGTTTGCTT CTTAAATGGA GAAGATTCGC TAATCCAGAA
GGAGAAGTTT GGTGGTTGTC TTGGATTTTT TTGTCATTTG CAGTTTTAAC TAAAGGTCCT
GTAGCATTGG TTTTATCAGG ATTAACAATA TTATTTTTTG CCTTTTTTCA AAATAAGCCT
TTAGGAATTT TAAAAATATT GAGGGTAATT CCTGGACTTT TTCTTGTCTT TATTATTAGT
TTTCCTTGGT ATTTAATTGA ATTATTAATC GAGGGAAAAC CCTTTTTAGA TAGTTTTTTT
GGGTATCATA ATCTTCAAAG ATTTACCTCA GTAGTAAATT CTCATGGGGA GCCTTGGTGG
TTTTTTTTAA CAGTATTATG TATAGCTTCT TTGCCATTTA CTCCATTTTT ATTAATAAGT
ATTTGGAAGA ATTTTTACAA TGTAACTAAA TGGTCTAGAA GAGTTATAAA AAGACCAGAA
AAGTCATTAT TTGAGTTTTC ATTTTTTTGG TTAATAGCTG TATTTGTGTT CTTTACTATT
TCAGCTACGA AGCTACCGAG CTATTGGCTT CCTGCTACTC CTGCAGCATC AGTTTTAATA
TCACTTTCCT TAACTAATAA TGTTAAAGAG GAATTTTTAA AATCTTTAGC TTGGAAATTT
ACAATATTTT TATCAATACT CTTTTCTATA TTTCTTTTCT CTTCAAAGCT ATGGATTCAG
CTTCTTAATG ATCCTGAGAT TCCAAACTTC TCAGAGGAAT TAAACAATAG CTTTTTAATT
GAAAAAGCTG GATTTATTTT TCTTTTAATT GCTGTTCTAG GAATCATATT TTCATCGAGA
AAAATATATG GAAAACTATT AATTTTGCAA ATCCCTTTAG TTTTATCTCA TTTCCTGATT
GTCTTACCAA CTTTTGATTT GGCAGATAGG TTAAGACAAC TCCCATTAAG ACAAGCATCA
GAATTACTTT TAAATTCCCA AAATAGAAAC GAGCCTTTAG TAATGGTAGG AGCTATGAAA
CCCTCAATTC ATTTTTATAC TAATCAAGTC ATTGTTTTTG AAGGTAGATC TAAAAATGCT
TTTGTAAATG TTTCAGATCG ACTTAAAAAT GAGAAGAGAA GAGGCTGGAA AGGAATGCCA
ATATATGGAT CCAATGGATC ACAAACTACT CTTTTACTTA TTGATAAAAG ATCAGTGGAA
AAATCTTATT GGCAAGGACT TAATCCAGAA GTCTTAGGTA ATTTTGGTGT TTATAGCGTT
TGGAGACTTG ATAGAGAAAT TATTGAAAGA CGAGCTAAAT ATTTGAAAAC AGATGGTGTT
AGTTCTACTT GGAAAAATCC TAGACCAGAG AGATTTTAA
 
Protein sequence
MKSLTKSFYP TLIQRRRGLL CILFIGLIIF VWQLGKTGLV DETPPLFAAA SRAMAETGNW 
FTPQVNGLPR FDKPPLVYWL MGLGFSIPGN NSWDPLGTWA ARLPSALSTI FLMLVLGDTM
MKYPQEENNF NRRTAVITAV VFALSPLVII WGRIAVSDAL LCSTLGICLL LKWRRFANPE
GEVWWLSWIF LSFAVLTKGP VALVLSGLTI LFFAFFQNKP LGILKILRVI PGLFLVFIIS
FPWYLIELLI EGKPFLDSFF GYHNLQRFTS VVNSHGEPWW FFLTVLCIAS LPFTPFLLIS
IWKNFYNVTK WSRRVIKRPE KSLFEFSFFW LIAVFVFFTI SATKLPSYWL PATPAASVLI
SLSLTNNVKE EFLKSLAWKF TIFLSILFSI FLFSSKLWIQ LLNDPEIPNF SEELNNSFLI
EKAGFIFLLI AVLGIIFSSR KIYGKLLILQ IPLVLSHFLI VLPTFDLADR LRQLPLRQAS
ELLLNSQNRN EPLVMVGAMK PSIHFYTNQV IVFEGRSKNA FVNVSDRLKN EKRRGWKGMP
IYGSNGSQTT LLLIDKRSVE KSYWQGLNPE VLGNFGVYSV WRLDREIIER RAKYLKTDGV
SSTWKNPRPE RF