Gene PMN2A_0751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0751 
Symbol 
ID3606129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1262828 
End bp1264066 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content39% 
IMG OID637687614 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_291945 
Protein GI72382590 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCCA TAAGCGTTTT AGGCTCAACA GGATCTATTG GAACTCAAAC CCTTCAAATT 
GCAGAAGAGT TTCCTGAGCA ATTCAAAATT GTTGCTCTAA CAGCAGGAAA GAATCTTGAT
TTAGTAATCA AACAAATTGA AACTCATCAA CCTGAAGTTG TTTCACTAGC AGATGAATCG
CTTTTATCAG AACTTTCTTC TCGAATTAAT AGTCTCACTG AAAATAAAAA AATAGTCAAA
AAGCCCTTAT TGATGGCGGG AGCCGAAGGA CTTAATACTG CAGCAGCTTG GGGAAGTGCA
GATCTTGTTG TAACTGGAAT AGTTGGCTGT GCAGGCCTCC TACCAACACT TGCAGCTATT
GAAGCAGGGA AGGACCTAGC TCTAGCAAAT AAAGAAACTT TGATTGCAGC AGGACCAGTT
GTAATTCCGG CTTTAAAAAA AAGCGGCAGT AGACTCTTAC CTGCAGATTC AGAACACTCA
GCGATATTTC AATGTCTCCA AGGAACGCCA TGGGCTGACA ATGCAAGACT CTCAACTGGA
ATGCCTACTC CAGGATTTAA ATCAATACAA TTAACTGCAT CAGGGGGAGC CTTTAGAGAT
TGGAAAGCAG AAGATTTAGT CAAAGCAACT GTCGAGGATG CGACTAGCCA TCCTAATTGG
AGCATGGGAA AGAAAATAAC TGTAGATTCT GCAACCCTCA TGAATAAGGG ACTCGAAGTC
ATTGAAGCGC ATTATCTTTT TGGTCTTTCA TATGACCAAA TCGAAATCAT TATCCATCCA
CAAAGCATCA TTCACTCGAT GGTTGAATTG GATGATTCAT CAGTTTTAGC TCAATTGGGA
TGGCCAGATA TGAAGCTCCC TATTTTGTAT TGCTTAAGTT GGCCTAGTCG ACTTAAAACC
CCATGGCCAA GATTAAAGCT TACTCAAATA GGCAATTTAA CTTTTAAAGA ACCAGATACT
AAAAAATATC CATGTATGGA ACTTGCTTAC AGCGCAGGAA AATCAGGGGG GACAATGCCA
GCAGTGCTTA ATGCAGCTAA TGAAAAAGCA GTAGAACTTT TTCTAGAAGA AAGGTTTAAA
TTTATCGATA TTCCAAAAGT AATTGAGGCG ATTTGCGAGA AACATAAATG CGACCTAAAT
CTAAATCCAA GCCTCAGTGA AATTCTTGAA ATTGACAACT GGGCAAGAGA AGAAGTCTTA
GATTATTCAG AAAAAAATAT TACAAAAATG CAGTTTTAG
 
Protein sequence
MKAISVLGST GSIGTQTLQI AEEFPEQFKI VALTAGKNLD LVIKQIETHQ PEVVSLADES 
LLSELSSRIN SLTENKKIVK KPLLMAGAEG LNTAAAWGSA DLVVTGIVGC AGLLPTLAAI
EAGKDLALAN KETLIAAGPV VIPALKKSGS RLLPADSEHS AIFQCLQGTP WADNARLSTG
MPTPGFKSIQ LTASGGAFRD WKAEDLVKAT VEDATSHPNW SMGKKITVDS ATLMNKGLEV
IEAHYLFGLS YDQIEIIIHP QSIIHSMVEL DDSSVLAQLG WPDMKLPILY CLSWPSRLKT
PWPRLKLTQI GNLTFKEPDT KKYPCMELAY SAGKSGGTMP AVLNAANEKA VELFLEERFK
FIDIPKVIEA ICEKHKCDLN LNPSLSEILE IDNWAREEVL DYSEKNITKM QF