Gene PMN2A_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0718 
Symbol 
ID3606096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1211746 
End bp1212858 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID637687581 
Productchlorophyll a/b binding light harvesting protein PcbC 
Protein accessionYP_291912 
Protein GI72382557 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGCT ATGGAAATCC AGACGTTACT TACGAGTGGT GGGCTGGTAA TTCTGTGGTC 
ACAAGTCGTT CTGGTCGATT CATAGCCTCC CATATTGGGC ATACAGGCTT GATCGCATTC 
GCGGCTGGAG GAAGTACCCT TTGGGAACTT GCTCGCTACA ATCCAGAGAT CCCTATGGGG 
CATCAAAGCT CCTTATTCTT GGGGCATCTT GCCGCCTTTG GCGTAGGTTT TGACGAGGCT 
GGAGCTTGGA CTGGTGTTGG TGTAGCAGCC GTAGCCATTG TTCACTTGGT TTTGTCAATG 
GTTTACGGAG GTGGTGCTTT ATTGCATGCA GTTTATTTTG AAGCTGATGT TGCAGATAGT 
GAGGTTCCAA GAGCTAGAAA GTTTAAATTG GAATGGAATA ATCCGGATAA TCAGACGTTT 
ATCCTGGGCC ATCATTTATT CTTCTTTGGA ATGGCTTGCA TAGCCTTTGT TGAATGGGCA 
AGAATCCACG GCATATATGA TCCAGCTATT GGTTCGGTTA GACAGGTCAA TTACAATCTT 
GATTTGACGA TGATATGGAA TCGTCAATTT GATTTCATCG GAATTGATAG TCTCGAAGAT 
GTAATGGGTG GACATGCATT TCTTGCTTTT GCAGAATTGA CCGGAGCAAC TATTCATATG 
GTTGCAGGTT CAACTCAATG GGAAAACAAG AGACTTGGTG AATGGAGTAA GTACAAAGGA 
GCTGAATTGC TTTCTGCAGA GGCAGTCCTT TCATGGTCTC TTGCAGGTAT AGGTTGGATG 
GCAATTGTTG CAGCATTCTG GGCTGCTACC AATACAACCG TTTATCCCAT TGAGTGGTTT 
GGTGAGCCTT TGAAGTTACA GTTCTCAGTT GCTCCATATT GGATTGATAC AGCAGATAGC 
ACTGGCATAA CAGCTTTCTT TGGTCACACA ACTAGGGCTG CTTTAGTTAA TGTTCATTAT 
TACTTTGGAT TTTTCTTCTT ACAGGGTCAT TTCTGGCATG CTTTACGTGC TTTAGGATTT 
GACTTCAAGA AAGTTTCCGA AGCAATTGGT AATACTGAAG GCGCAACAGT CAGGGTTGAA 
GGCGCTGGTT TCAATGGAAG AGCTCCAAGA TAG
 
Protein sequence
MQSYGNPDVT YEWWAGNSVV TSRSGRFIAS HIGHTGLIAF AAGGSTLWEL ARYNPEIPMG 
HQSSLFLGHL AAFGVGFDEA GAWTGVGVAA VAIVHLVLSM VYGGGALLHA VYFEADVADS 
EVPRARKFKL EWNNPDNQTF ILGHHLFFFG MACIAFVEWA RIHGIYDPAI GSVRQVNYNL 
DLTMIWNRQF DFIGIDSLED VMGGHAFLAF AELTGATIHM VAGSTQWENK RLGEWSKYKG 
AELLSAEAVL SWSLAGIGWM AIVAAFWAAT NTTVYPIEWF GEPLKLQFSV APYWIDTADS 
TGITAFFGHT TRAALVNVHY YFGFFFLQGH FWHALRALGF DFKKVSEAIG NTEGATVRVE 
GAGFNGRAPR