Gene PMN2A_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0717 
Symbol 
ID3606095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1210511 
End bp1211566 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content44% 
IMG OID637687580 
Productchlorophyll a/b binding light harvesting protein PcbH 
Protein accessionYP_291911 
Protein GI72382556 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCT ACGGAAACCC AGACGTCACC TACGGGTGGT GGGTTGGCAA TTCTGTGGTG 
ACCAATCGCG CTGGTCGATT CATAGGGTCA CATATCGGAC ACACAGGCCT GATTTGCTTT 
GCAGCTGGTG GAAGTACCCT TTGGGAGCTT GCTCGCTACA ACCCAGAAAT ACCAATGGGA 
CATCAAAGTT CCATTTTTCT TGCTCATCTA GCATCTCTTG GCCTCGGCTT TGATGAAGCA 
GGAGTATGGA CCGGAGCTGG TGTAGCAACA ATTGCTATTT TCCATTTGAT TTTTTCAGCT 
GTATATGGAA CAGCTGGATT AGCTCATTCA CTCTTATTTG ACCCGGACTT GAAAGATGGT 
CCAATTCCTA CCACCAAGAA ATTCAAACTT GAATGGGACA ATCCAGATAA TTTGACATTC 
ATTCTTGGAC ATCACTTGAT TTTCTTTGGG GTTGCAAATA TTTGGTTCGT CGAGTGGGCA 
AGGTGGCATG GAATTTATGA TCCAGCCATA GGTGAAATCA GAACAATCTT CCCTGGATAT 
GGTGATTTTG GAATGGTTTA CGGGCATCAG TTCGACTTCC TTACCATTGA CAGCCTAGAA 
GAAGTAATGA GCGGTCATGC ATTCTTAGCA TTCGTTCAAA TAAGTGGTGG TGCATGGCAC 
ATCGCTACAA AACAACTAGG CGAATACACT GAGTTCAAAG GTAAAGGATT GCTTTCAGCA 
GAAGCCGTTC TCTCCTGGTC TCTTGCTGGT ATTGGTTGGA TGGCAATTGT TGCTGCATTC 
TGGTGCGCAC AAAATACAAC TGTTTATCCA ATTGACTGGT ATGGAGAGCC TTTAGCTTTG 
AAATTTGGAA TTTCTCCTTA TTGGGTAGAC ACGGGAGATG TCTCAGATAG CACTGCGTTT 
TTAGGTCATA CAACTAGAGC AGCATTGTCA AATGTTCATT ATTACTTTGG ATTTTTCTTT 
ATTCAAGGTC ATATTTGGCA TGCTCTTAGA GCCATGGGCT TTGATTTCCG TCGTGTTGTT 
GGATCAGTAG CTTCTCTCGC AACAACTGAG AGTTAG
 
Protein sequence
MQTYGNPDVT YGWWVGNSVV TNRAGRFIGS HIGHTGLICF AAGGSTLWEL ARYNPEIPMG 
HQSSIFLAHL ASLGLGFDEA GVWTGAGVAT IAIFHLIFSA VYGTAGLAHS LLFDPDLKDG 
PIPTTKKFKL EWDNPDNLTF ILGHHLIFFG VANIWFVEWA RWHGIYDPAI GEIRTIFPGY 
GDFGMVYGHQ FDFLTIDSLE EVMSGHAFLA FVQISGGAWH IATKQLGEYT EFKGKGLLSA 
EAVLSWSLAG IGWMAIVAAF WCAQNTTVYP IDWYGEPLAL KFGISPYWVD TGDVSDSTAF 
LGHTTRAALS NVHYYFGFFF IQGHIWHALR AMGFDFRRVV GSVASLATTE S