Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0560 |
Symbol | |
ID | 3605935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1060998 |
End bp | 1061843 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637687420 |
Product | endonuclease VIII |
Protein accession | YP_291754 |
Protein GI | 72382399 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.602163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAG GACCAGAGAT TAGACGAGCT GCAGATAAGA TAAGTAAAGT TTTAATTGGC GAAGAAATTA TTGAAAGTAA TTTTTACTAT GAACGAATAA AGGAGAAAGA GGAGATAGTC AAAAACCAAA ATATCAAAGA CATAACAACT AGAGGAAAGG CAATGCTTAT CCGATTCAAG AATAATTGGT CAATGTATAG CCATAATCAG TTATATGGAA GATGGACAGT AAATTTAAAT ACAACAAAAG TCAAATCAAG AAGAGCTCTT AGAGTAGTTT TCACAACAAA TAAACATGCT GTTAGATTGT GGTCAGCGAC AGATATTGAT TTAATTCCAA CAGATGAAGA GAATGAACAT TCATTCTTAA AAAAAATTGG GCCTGATGTC CTGAGTGAAT CTTGCAGTTT AGATTTAATA GAAGAAAGAT TAACGTCAAC AAGTTTCCAT AAAAAGAAAG CCTCAACTTT GATGCTTGAT CAGGCTTTCT TTGCTGGATT AGGTAACTAT CTTCGCTCAG AAATCTTATT CGATGCAAAA ATACATCCAG ATGATAGACC GTTTGATCTT GATAAAACGA AAATTACCCA ATGGGCAAAA TCAATAAAAA ACATCTCACA GTTAGCCTAT AAAACTGGAG GTTTTACAGT CTCAAAATCA TTAGCAGATA GAAACAAAGA GAATGGAGAG CCAAGAAGAT CTTATAGACA TGCTGTTTTC ATGCGACACC AATATGAATG TTTAAATTGC AAGGATCGTA TAGAAAGGAA ATGGTATGGG AAAAGGAAAG TTGATTATTG TCCGAGCTGT CAAATTCAAA GAGGTAAAAT CAAACCCACC AAATAA
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Protein sequence | MPEGPEIRRA ADKISKVLIG EEIIESNFYY ERIKEKEEIV KNQNIKDITT RGKAMLIRFK NNWSMYSHNQ LYGRWTVNLN TTKVKSRRAL RVVFTTNKHA VRLWSATDID LIPTDEENEH SFLKKIGPDV LSESCSLDLI EERLTSTSFH KKKASTLMLD QAFFAGLGNY LRSEILFDAK IHPDDRPFDL DKTKITQWAK SIKNISQLAY KTGGFTVSKS LADRNKENGE PRRSYRHAVF MRHQYECLNC KDRIERKWYG KRKVDYCPSC QIQRGKIKPT K
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