Gene PMN2A_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0560 
Symbol 
ID3605935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1060998 
End bp1061843 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content34% 
IMG OID637687420 
Productendonuclease VIII 
Protein accessionYP_291754 
Protein GI72382399 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.602163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAAG GACCAGAGAT TAGACGAGCT GCAGATAAGA TAAGTAAAGT TTTAATTGGC 
GAAGAAATTA TTGAAAGTAA TTTTTACTAT GAACGAATAA AGGAGAAAGA GGAGATAGTC
AAAAACCAAA ATATCAAAGA CATAACAACT AGAGGAAAGG CAATGCTTAT CCGATTCAAG
AATAATTGGT CAATGTATAG CCATAATCAG TTATATGGAA GATGGACAGT AAATTTAAAT
ACAACAAAAG TCAAATCAAG AAGAGCTCTT AGAGTAGTTT TCACAACAAA TAAACATGCT
GTTAGATTGT GGTCAGCGAC AGATATTGAT TTAATTCCAA CAGATGAAGA GAATGAACAT
TCATTCTTAA AAAAAATTGG GCCTGATGTC CTGAGTGAAT CTTGCAGTTT AGATTTAATA
GAAGAAAGAT TAACGTCAAC AAGTTTCCAT AAAAAGAAAG CCTCAACTTT GATGCTTGAT
CAGGCTTTCT TTGCTGGATT AGGTAACTAT CTTCGCTCAG AAATCTTATT CGATGCAAAA
ATACATCCAG ATGATAGACC GTTTGATCTT GATAAAACGA AAATTACCCA ATGGGCAAAA
TCAATAAAAA ACATCTCACA GTTAGCCTAT AAAACTGGAG GTTTTACAGT CTCAAAATCA
TTAGCAGATA GAAACAAAGA GAATGGAGAG CCAAGAAGAT CTTATAGACA TGCTGTTTTC
ATGCGACACC AATATGAATG TTTAAATTGC AAGGATCGTA TAGAAAGGAA ATGGTATGGG
AAAAGGAAAG TTGATTATTG TCCGAGCTGT CAAATTCAAA GAGGTAAAAT CAAACCCACC
AAATAA
 
Protein sequence
MPEGPEIRRA ADKISKVLIG EEIIESNFYY ERIKEKEEIV KNQNIKDITT RGKAMLIRFK 
NNWSMYSHNQ LYGRWTVNLN TTKVKSRRAL RVVFTTNKHA VRLWSATDID LIPTDEENEH
SFLKKIGPDV LSESCSLDLI EERLTSTSFH KKKASTLMLD QAFFAGLGNY LRSEILFDAK
IHPDDRPFDL DKTKITQWAK SIKNISQLAY KTGGFTVSKS LADRNKENGE PRRSYRHAVF
MRHQYECLNC KDRIERKWYG KRKVDYCPSC QIQRGKIKPT K