Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0254 |
Symbol | |
ID | 3605626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 798021 |
End bp | 798770 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637687112 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_291449 |
Protein GI | 72382094 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.275459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA AGATAATTAA ATATTTAACC CTAATAATTG ATAAGCTATA TTCTGTTAAA AGTATAGAAA AAACAAATAA GAAATTGCAA CATACAATAT TAAAAAATGA TCTTACAGCA AAGCTAAAAG ATAATGAGCA AGAAATACTT TTTGGATGTG GCTGCTTTTG GGGTGCAGAG AAAGGCTTCT GGAGGCTTCC AGGAGTCATA ACAACTTCAG TAGGTTATGC AGGAGGCGAG AAGGAAAATC CAAACTACAG GGAGGTATGT TCTGGACTAA CAGGTCATAC CGAAGTCGTG AGAGTTGTTT GGAATAACAA TGAAATTGAT CTAAGCGATC TACTAAAATT ATTTTGGGAA TGCCATGACC CAACACAAGG CAATCGTCAG GGAAACGATA GTGGAAGCCA ATATAGATCA GCGATTTATA CGACAAGCAA AGAGCAGCTA AGTAAAGCGA TAGAAAGCAA AAATAGCTAT CAAATAGAAC TAAAAAATAA TGGCTTTGGC ATTATTACTA CAGAGATTGA GAATGATATT AAATTTTATT TTGCAGAGGA CTATCACCAA CAATATTTAG CAAAGCCTGG TAGCAGACCA TATTGCTCTG CGATGCCAAC AAAGGTAACA TTTAAAAATT TTAGTGGGGC AAACTTTAAA CTAAATGAAA AAATTTGGTC TAACTATAAT TGGGACATAA CGCATTGTAT TCTTAGAGGA GAGAACACAC CTATTGAATC TAATTTATAA
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Protein sequence | MIKKIIKYLT LIIDKLYSVK SIEKTNKKLQ HTILKNDLTA KLKDNEQEIL FGCGCFWGAE KGFWRLPGVI TTSVGYAGGE KENPNYREVC SGLTGHTEVV RVVWNNNEID LSDLLKLFWE CHDPTQGNRQ GNDSGSQYRS AIYTTSKEQL SKAIESKNSY QIELKNNGFG IITTEIENDI KFYFAEDYHQ QYLAKPGSRP YCSAMPTKVT FKNFSGANFK LNEKIWSNYN WDITHCILRG ENTPIESNL
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