Gene PMN2A_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0221 
Symbol 
ID3605591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp770645 
End bp771688 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content32% 
IMG OID637687077 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_291416 
Protein GI72382061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000600389 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTTC TTTTAACTGG TGGTTCAGGA TTCATAGGTT CTCATGTCGC TTTGTTGTTG 
ATAGAAAGGG GATTGGATGT TTTAATATTA GATTCTTTTG CTAATAGCTC ATCTAATGTT
ATCAATCGAA TTAATACTTA TTTAGATGAT AAACTGTTAA AATATAGATT AGAAATAATT
AATGGTGATA TTAGAGATAA AAAACTTTTA GAAAGTATTT TTAGTGATTC GATTAATAGC
CATAAACCTA TAGATATCGT TATACATTTA GCTGGCTTGA AATCTGTAGC TGAATCTCTT
ACTAATCCTA TTCACTATTG GGATGTGAAT GTTCATGGAA CACTAAATCT TTTACTTACA
ATGAAAGAAT ATGAATGTTA TTCCTTTGTT TTTAGTAGTA GTGCCACTAT TTATGGTTTA
AGCGATTCCG TTCCTATGGC AGAAGATCAC AGGATCTCAC CAATTAACCC CTACGGCAAA
ACTAAAGTGG CAATTGAGAA TATGTTTTAT GATTTATATA ATTCTAATAA CTTATGGAAA
ATATGTTCTT TACGTTATTT CAATCCTGTT GGAGCGCATC CATCAGGATT GATTGGTGAA
GATCCCATTG GGATTCCCAA TAATCTTTTT CCTTTCTTAA CTCAGGTAGC TATAGGAAAG
CGAAAATTTT TAAATGTCTT CGGAGATAAC TGGGATACGT ATGATGGCTC AGGTATCCGT
GATTATATTC ATATTATGGA TTTAGCTGAG GGCCATTTAG CCTCATTAGA TTATATTAGC
TCTTCTGATT CATGTTTGGA ATTTATTAAT TTAGGCTCTG GTAATGGATA TAGTGTTTTT
CAGATTATTA GACAATTTGA GTTGACTACT GGTTGCCAAA TTCCTTTTTC TATTCAAAAC
AGAAGAGATG GTGATGTCGC TATATCTTAT GCAGATATTT CAAAAGCCAA GAAATTATTA
GGTTGGACTC CAAAAAGAAC ATTAGAACAA ATTTGCTTAG ATGGATGGAA CTGGCAAATT
AGAAATCCAA ATGGTTATAA CTAA
 
Protein sequence
MRVLLTGGSG FIGSHVALLL IERGLDVLIL DSFANSSSNV INRINTYLDD KLLKYRLEII 
NGDIRDKKLL ESIFSDSINS HKPIDIVIHL AGLKSVAESL TNPIHYWDVN VHGTLNLLLT
MKEYECYSFV FSSSATIYGL SDSVPMAEDH RISPINPYGK TKVAIENMFY DLYNSNNLWK
ICSLRYFNPV GAHPSGLIGE DPIGIPNNLF PFLTQVAIGK RKFLNVFGDN WDTYDGSGIR
DYIHIMDLAE GHLASLDYIS SSDSCLEFIN LGSGNGYSVF QIIRQFELTT GCQIPFSIQN
RRDGDVAISY ADISKAKKLL GWTPKRTLEQ ICLDGWNWQI RNPNGYN