Gene PMN2A_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0215 
Symbol 
ID3605585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp765179 
End bp766237 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content43% 
IMG OID637687071 
Productchlorophyll a/b binding light harvesting protein PcbD 
Protein accessionYP_291410 
Protein GI72382055 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGACCT ACGGGAATCC TAGCGTTACC TATGACTGGT ACGCGGGTAA TTCAGGGACG 
GCCAATCGCT CCGGAAAATT CATCGCTGCG CATGCTGCCC ATGCTGGTTT GATGATGTTC 
TGGGCAGGTG CGTTCACTTT ATTTGAGCTA GCTCGTTATG ACTCATCCGT TGCGATGGGT 
AATCAAAACT TGATCTGCTT GCCTCACCTT GCACAACTTG GAATAGGTGG AATTGAAAAC 
GGAGTAATAA CTGAACCTTA CGGTTGCACA GTTATTGCTG TACTTCACCT GATTTTCTCT 
GGTGTTCTTG GTGCTGGTGG AATTCTTCAC TCAACAAGAT ATGACGGTGA TTTAGGAAAC 
TATCCTGAAG GAAGTCGTCC TAAAAAGTTT GACTTCGAGT GGGACGATCC AGACAAACTT 
ACATTTATTC TTGGTCATCA CCTTATTTTC CTAGGTTTGG CAAACATTCA ATTCGTTGAA 
TGGGCTCAAT ATCATGGTAT TTGGGATACT GCTTTAGGAG CTACTCGTAC AGTTTCTTAC 
AACCTAGATT TAGGAATGAT ATGGAATCAC CAAGCTGATT TCCTTCAAAT CACTAGTTTG 
GAAGATGTTA TGGGCGGTCA TGCTTTCTTA GCATTTTTCC AAATTATTGG TGGTGCATTC 
CACATCATCA CTAAGCAATT TGGTGAGTAC ACAGAATTCA AAGGGAAAGG ACTTCTTTCC 
GCTGAAGCTG TTCTTTCATA CTCATTAGCT GGTGTTGGCT ATTGTGCACT TGTTGCAGCT 
TTCTGGAGTT CAACAAACAC AACTGTTTAC TCCACAGAAT TCTTCGGCGA AGTACTTCAA 
CTTAAGTTTG ATTTCGCTCC TTATTTTGTT GATACCGACC CATCACTTGC TGCTGGCGCT 
CATACAGCTA GAGCTTGGTT AGCTAATGTT CATTTCTATC TTGGCTTCTT CTTCATCCAG 
GGGCATCTCT GGCATGCACT AAGAGCTATG GGATTTGACT TCAGACGCGT GGGTAAAGCG 
TTCGACAATA TGGAAAACGC AAAAATCACT AACGGTTAA
 
Protein sequence
MQTYGNPSVT YDWYAGNSGT ANRSGKFIAA HAAHAGLMMF WAGAFTLFEL ARYDSSVAMG 
NQNLICLPHL AQLGIGGIEN GVITEPYGCT VIAVLHLIFS GVLGAGGILH STRYDGDLGN 
YPEGSRPKKF DFEWDDPDKL TFILGHHLIF LGLANIQFVE WAQYHGIWDT ALGATRTVSY 
NLDLGMIWNH QADFLQITSL EDVMGGHAFL AFFQIIGGAF HIITKQFGEY TEFKGKGLLS 
AEAVLSYSLA GVGYCALVAA FWSSTNTTVY STEFFGEVLQ LKFDFAPYFV DTDPSLAAGA 
HTARAWLANV HFYLGFFFIQ GHLWHALRAM GFDFRRVGKA FDNMENAKIT NG