Gene PMN2A_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0180 
Symbol 
ID3605550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp735971 
End bp737641 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content42% 
IMG OID637687036 
Productdihydroxy-acid dehydratase 
Protein accessionYP_291375 
Protein GI72382020 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGAT CAAATGCAAT AACACAGGGT ATTCAACGAT CACCAAACCG AGCAATGCTT 
AGAGCTGTTG GGTTTGATGA TAATGATTTT AACAAGCCAA TCATTGGAAT AGCTAATGGG
CACAGCACAA TAACCCCATG CAATATGGGA TTAATGGATT TAGCTAATAG AGCAGAGTCA
GCGTTAAAAG AGGCTGGTGC AATGCCTCAA ACTTTCGGAA CCATAACTGT TAGTGACGGC
ATTTCCATGG GAACGGAAGG GATGAAATAC TCATTAGTTT CAAGAGAAGT TATTGCAGAT
TCAATCGAGA CGGCTTGCAA TGCTCAAAGC ATGGATGGGG TGTTAGCGAT AGGTGGATGC
GATAAAAATA TGCCAGGAGC AATGTTATCA ATGGCAAGAA TGAACATACC TTCGATTTTT
GTTTATGGGG GGACAATTAA ACCTGGGAAA TTAGACGGTT GCGACTTGAC CGTGGTGAGT
TCATTTGAGG CTGTCGGTCA ATTAGCAAGC GGAAAAATCG ACAAAGATCG TTTAATAGCT
GTAGAAAAAA ATGCTATCCC TGGACCAGGC AGTTGCGGAG GGATGTTTAC TGCTAATACC
ATGTCTGCGG CAATAGAAAC GATGGGTTTT AGTTTGCCAT TTAGTTCAAC AATGGCTGCA
GTAGATGATG AAAAAGCAGA AAGCGCTGCT GAAAGTGCTC AGGTCCTTGT AAATGCAGTA
AAGAATAACA TCAGGCCATT AGATTTACTT ACGAAAGAAG CCTTTGAGAA TGCAATCAGT
GTCATCATGG CTGTAGGCGG CTCAACAAAT TCTGTCCTTC ACCTACTTGC TATAGCTAGG
ACTGCAGGAG TTGATTTAAC GATCGATGAC TTTGAACGTA TAAGGCAGAC TGTTCCTGTG
ATTTGCGACC TCAAACCAAG CGGTAAATAC GTAACAGTCG ACCTACATAA AGCTGGTGGG
ATTCCTCAAG TAATGAAATT ACTCCTCGAT GCAGGAATGC TACATGGAGA ATGCAAAACC
ATTGAAGGAA AAACAATTAA AGAAGTTCTT AGAGATATCC CCTCAAAGCC CAAAGAAAAT
CAAGACGTTA TAAGACAAAT ATCAAACCCT ATTTATAAAA AAGGACATCT TGCTATTCTC
AAAGGAAATT TAGCAAGTGA AGGAAGTGTC GCAAAAATTA GTGGTGTAAA GACTCCCGTT
TTAACCGGGC CTGCAAGGGT CTTTGAGAGT GAAGAAGAAT GCTTAACTGC CATTCTTGAC
AATAAAGTAA AAGCTGGAGA TGTAGTCGTC GTTAGGTATG AAGGACCTGT AGGAGGGCCT
GGGATGAGGG AGATGCTCTC TCCAACCTCA GCGATTGTAG GTCAAGGTTT AGGAGAGAAA
GTTGCACTAA TTACTGATGG TCGATTTAGT GGAGGATCAT ATGGATTAGT GGTTGGCCAC
GTTGCTCCAG AAGCAGCCGT CGGAGGAACA ATTGGATTAG TAGAGGAAGG AGACAGTATT
ACCGTTGACG CTAATAAATT GTTAATTCAA TTAAATGTCG AAGAGCGAGA ACTAGCTAGA
AGAAAACAGA AATGGGAGAA GCCAAAGCCT AGATATAAGA CAGGCATTCT TGGGAAGTAT
TCCAGATTAG TAAGTTCATC AAGCCAAGGA GCGACAACTG ATCAAATATA A
 
Protein sequence
MLRSNAITQG IQRSPNRAML RAVGFDDNDF NKPIIGIANG HSTITPCNMG LMDLANRAES 
ALKEAGAMPQ TFGTITVSDG ISMGTEGMKY SLVSREVIAD SIETACNAQS MDGVLAIGGC
DKNMPGAMLS MARMNIPSIF VYGGTIKPGK LDGCDLTVVS SFEAVGQLAS GKIDKDRLIA
VEKNAIPGPG SCGGMFTANT MSAAIETMGF SLPFSSTMAA VDDEKAESAA ESAQVLVNAV
KNNIRPLDLL TKEAFENAIS VIMAVGGSTN SVLHLLAIAR TAGVDLTIDD FERIRQTVPV
ICDLKPSGKY VTVDLHKAGG IPQVMKLLLD AGMLHGECKT IEGKTIKEVL RDIPSKPKEN
QDVIRQISNP IYKKGHLAIL KGNLASEGSV AKISGVKTPV LTGPARVFES EEECLTAILD
NKVKAGDVVV VRYEGPVGGP GMREMLSPTS AIVGQGLGEK VALITDGRFS GGSYGLVVGH
VAPEAAVGGT IGLVEEGDSI TVDANKLLIQ LNVEERELAR RKQKWEKPKP RYKTGILGKY
SRLVSSSSQG ATTDQI