Gene PMN2A_0166 details

Gene Information

• Locus tag: PMN2A_0166
• ID: 3605536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 721063
• End bp: 722859
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637687022
• Product: GTP-binding protein TypA
• Protein accession: YP_291361
• Protein GI: 72382006
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0168881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG ATATACAAGC TATTAGGAAT ATCGCAATAA TTGCTCACGT TGATCATGGT 
AAGACAACTT TGGTTGATGC TCTTTTAAAT CAATCTGGCA CTTTTCGAGA TAACGAAGAA 
GTCCCAACTT GTGCGTTGGA TTCGAATGAA TTGGAACGTG AAAGAGGTAT AACAATTCTT 
TCGAAAAACA CAGCTGTTAC TTATAACGAT ACTCGGATAA ACATTGTTGA TACACCAGGG 
CACGCTGATT TTGGAGGAGA AGTTGAGAGG GTTTTGGGAA TGGTAGATGG CTGTCTTCTT 
GTTGTTGATG CTAACGAGGG ACCAATGCCA CAAACTCGAT TTGTTCTGAA AAAAGCTTTA 
GAGCAAGGCT TAAGACCTAT TGTGTTTGTG AATAAAATTG ATCGTGCAAG GGTAGAACCA 
GAAACCGCGG TAGACAAAGT TTTAGATCTG TTTTTGGAGT TAGGCGCTGA TGATGATCAA 
TGTGATTTTC CTTATCTATT TGGGAGTGGA TTAGGGGGGT TTGCCAAGAC TGAAGTAAAA 
AGTGAAAACG ATAATATGAA ACCTTTATTT GAAGCAATTA TTAGACAAGT TCCTCCTCCA 
GTTGGCGACG TGAAAAAGCC TTTACAATTA CAAGTCACCA CCCTAGATTA CTCAGATTTC 
TTAGGAACAA TTATTATCGG TAGAGTACAT AATGGTGTAA TTAAAAACGG CCAAAGGACT 
TGTTTGATAA AGGAAGATGG GAGTTTGAAA AAAGGAAGGA TTAATAAATT ATTAGGATTT 
AAGGGATTAA AAAGAATTGA AATAGAAGAA GCAAATGCTG GAGATATAGT CGCCTTAGCT 
GGTTTTGATG AGGTTTCTAT TGGTGAAACT GTAGCCTGCC CTGATGAGCC GAAACCTTTA 
CCTCTAATCA AGGTTGATGA GCCAACCTTG CAGATGACTT TTGTTGTTAA TGATTCTCCT 
TTTGCGGGGA AAGAGGGCAA GTTCGTAACT AGCCGGCAGT TGAAGGATCG TTTAAATAAA 
GAACTTCTAA CGAATGTTGC TTTAAGAGTT GAAGACACAG ATTCTCCTGA CCGTTTTTCT 
GTTAGTGGAA GGGGAGAGTT ACATCTAGGA ATTCTTATAG AGACAATGAG AAGAGAGGGG 
TATGAATTTC AAGTTTCTCA ACCACAAGTA ATTTTCAGGA CAATAGATGA AATTAAATGT 
GAACCTGTTG AAACACTTGT CCTTGATGTC CCTGAAGCTT CTATTGGTGC TTGTATTGAG 
AGCCTTGGGG TAAGAAAAGG TGAAATGCAA AATATGGAAA CTGGTACTGA TCATCGAACT 
CAGCTTGAGT TTGTTATCCC CTCAAGAGGC TTGATTGGAT TTAGGGGTGA ATTTATTCGT 
GCAACAAGAG GTGAAGGGAT TATGAGCCAT TCATTTTTTG AATACAGGCC ATCTGTAGGA 
GATTTTGAGC AAAGGAGAAA TGGAGTCCTT ATCTCATTTG AAGAAGGTGT CGCTACTTTC 
TATTCCTTAA AGAATGCAGA AGACCGTGGA CAATTTTTTA TTACTCCTGG AGCCAAGGTT 
TATAAAGGAA TGATTATTGG GGAGAATAAA CGCCCACAAG ATCTTGAATT AAATATTTGC 
AGGGCTAAAC AACTTACCAA TATGCGATCA GCTGGTGCAG ATGAGCTAGA TCAATTGCAA 
TCCCCAATTG AAATGACATT AGAAAGAGCT CTTGAATACA TTGGACCAGG AGAGATGTTG 
GAAGTTACTC CTGAATCTAT AAGGCTTAGA AAACTTAAAG CAAAGAAAAA TTTGTAA 

 

Protein sequence

MSFDIQAIRN IAIIAHVDHG KTTLVDALLN QSGTFRDNEE VPTCALDSNE LERERGITIL 
SKNTAVTYND TRINIVDTPG HADFGGEVER VLGMVDGCLL VVDANEGPMP QTRFVLKKAL 
EQGLRPIVFV NKIDRARVEP ETAVDKVLDL FLELGADDDQ CDFPYLFGSG LGGFAKTEVK 
SENDNMKPLF EAIIRQVPPP VGDVKKPLQL QVTTLDYSDF LGTIIIGRVH NGVIKNGQRT 
CLIKEDGSLK KGRINKLLGF KGLKRIEIEE ANAGDIVALA GFDEVSIGET VACPDEPKPL 
PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQLKDRLNK ELLTNVALRV EDTDSPDRFS 
VSGRGELHLG ILIETMRREG YEFQVSQPQV IFRTIDEIKC EPVETLVLDV PEASIGACIE 
SLGVRKGEMQ NMETGTDHRT QLEFVIPSRG LIGFRGEFIR ATRGEGIMSH SFFEYRPSVG 
DFEQRRNGVL ISFEEGVATF YSLKNAEDRG QFFITPGAKV YKGMIIGENK RPQDLELNIC 
RAKQLTNMRS AGADELDQLQ SPIEMTLERA LEYIGPGEML EVTPESIRLR KLKAKKNL