Gene PMN2A_0158 details

Gene Information

• Locus tag: PMN2A_0158
• Symbol: tsf
• ID: 3605528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 709076
• End bp: 709732
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637687014
• Product: elongation factor Ts
• Protein accession: YP_291353
• Protein GI: 72381998
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.496244
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAA TAACAGCTAA ACTCGTTAAA GAACTGCGAG ATAAGACATC TGCAGGAATG 
ATGGATTGTA AAAAAGCCCT TATTGAAAAT AAGGGTGATA TGGATAAGTC TATTGAGTGG 
TTAAGACAAA AAGGCATTGC TAGCGCAGAA AAGAAATCAG GTAGAGTTGC CGCTGAGGGC 
GCTGTAGGAA GTTACATTCA TACAGGTTCT CGTGTGGGTG TTCTTCTAGA GCTGAACTGC 
GAGACTGATT TTGTTGCTAG AGGTGATTTA TTTCAAGGCC TTTTGAGAGA CTTATCAATG 
CAAGTAGCCG CTTGTCCAAG TGTTGAATAT GTAAGTGTTG ATCAAATTCC AGAATCAATT 
GCCAACAAAG AGAAAGAAAT AGAAATGGGA AGAGATGACC TCTCTGGTAA GCCTGATCAA 
ATAAAAGCTA AAATTGTTGA AGGAAGAATA GGTAAGAGAT TGAAAGAAAT GGCTCTCTTA 
GAACAGCCAT TCATAAAAGA TAGTTCAATA AATGTTGAAG AGTTGGTAAA ACAAGTTGCT 
GGTAAAATTG GCGAAAATAT AAGAGTTCGT AGATTTACCA GATATATACT TGGAGAGGGG 
ATTGAGGTTC AAGGACCTGA CTTCGCAGAA GAGGTCGCAT CTATGACTTC AGGTTGA 

 

Protein sequence

MAEITAKLVK ELRDKTSAGM MDCKKALIEN KGDMDKSIEW LRQKGIASAE KKSGRVAAEG 
AVGSYIHTGS RVGVLLELNC ETDFVARGDL FQGLLRDLSM QVAACPSVEY VSVDQIPESI 
ANKEKEIEMG RDDLSGKPDQ IKAKIVEGRI GKRLKEMALL EQPFIKDSSI NVEELVKQVA 
GKIGENIRVR RFTRYILGEG IEVQGPDFAE EVASMTSG