Gene PMN2A_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0100 
Symbol 
ID3605451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp656091 
End bp656855 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content35% 
IMG OID637686956 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_291295 
Protein GI72381940 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA AAAGAAGATT ATTTATAAAA CTAAATCGAT TAAGAGATGA AATCGATTCA 
AATGGAGAGT TGAAATTGAC CTCTAATGAA TCACATTATT TATTCAGGGT TATGCGGATG
AGATCGGAAG ATCTTTTAGA AGTCATTGAT GGAAAAGGTC GTCTTTGGAA CGCTAAAATT
GTTGAACAAA AAGCTATAAA ACTTACCAAT GGTTTTGATA AGCCTCTTCA ATTCGTTTCA
AGAGAAAGAC CATTAATAGG AATTGCCATA GTTATTCCTA AAAAGGGGTT TGAAAACTTT
TTGCAAATGA GTTGTGAGAT AGGAGTTGAT ATTATTCAAC CATTAATTTC AAAACGATCA
GTAGTTAAAG AATGCAATAA CGAAAAAATT ATTAGATATA AAAAAATTAT TTATGAAGCC
GTTGAGCAAT CCGAAAGACT CTGGAGTCCA GAATTAATGC AGGTATTAAC ATTTCCCAAT
TGGATAAATG ATATGTCTTC GGAAGCTCAA GTCGGATTTG CTGCAACACG TATTGAAGAC
TTGCCAGATT GTGTGACTTG GGTAAAAGAA ACACCACATG AAGTCAATCA AGTTTGGGTG
GTGATTGGAC CAGAGGGAGG CTGGAATAAA GATGAAGAGG AATTAGCTTT TAACGCTGGA
TTCGTTGGGG TGTCTATGGG AGAAACTATT TTGAGGACAT CAACAGCTGC CGTAAGTGCC
TCACAAGTAA TGACTTCATG GAGAAGACTT AAATCATCCT TTTAA
 
Protein sequence
MAEKRRLFIK LNRLRDEIDS NGELKLTSNE SHYLFRVMRM RSEDLLEVID GKGRLWNAKI 
VEQKAIKLTN GFDKPLQFVS RERPLIGIAI VIPKKGFENF LQMSCEIGVD IIQPLISKRS
VVKECNNEKI IRYKKIIYEA VEQSERLWSP ELMQVLTFPN WINDMSSEAQ VGFAATRIED
LPDCVTWVKE TPHEVNQVWV VIGPEGGWNK DEEELAFNAG FVGVSMGETI LRTSTAAVSA
SQVMTSWRRL KSSF