| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0088 |
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| Symbol | |
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| ID | 3605438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 642329 |
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| End bp | 643972 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637686943 |
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| Product | glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
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| Protein accession | YP_291283 |
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| Protein GI | 72381928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.774612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACA AGCCCTATGA AGTCATAATT ATCGGTTCAG GTGCAACCGG GGGAATGGCA
GCCTTAACAA TGGCTAAGGC TGGTGTAAGA GTACTAGTAA TAGAAAGAGG TCCTGAACTA
GAGATCAAGC AGGCAAAAGG AACAGAGCCT TGCAATATGA TTCGGAGACT TTTAGGGGTA
ACAACTGGAA ATTATCAAAA TCAACCTCAA CATCCAGGGT TCTGGAAATC AAATCCCTTA
CTGTACGCAA ACAAAAAAGC AAATCCTTAT ACACACCCGC CAAAAGCCCC ATTCATGTGG
ACGCAAGGCA ATCAAGTTGG TGGAAGAAGC CTTACTTGGG GAGGGATAAC CTTAAGATTA
TCTGACGAGG ATTTTGAAGC CTCAAAAGAA AAAGAATACA ACCTCGAATG GCCTATTAGT
TACAAAGATC TTGAGTCGCA TTATTCGGAA ATAGAGAGTT TTCTAAAAAT ATATGGCAAC
AAAGACGATC TCAATCAACT ACCTAATGGT GAATATATTG GCAAACTTCC ATTTACAGAA
AGTGAATCAA GATTTGCCTC CAATATAAAA AAAAATTTAA ATCTTCCCTT TATACATTCC
AGAGGGTTTG GACCAAATGA AGATCAAACG AAATGGCCCA GATATAGCAG TTTAGGCAGC
ACATTAAAAG AAGCCGCTAG GCTAGGTAAA ATAGAAATAC TTTCAAATCA TATTGTAGAT
AAATTAGTTT TGAATAAGGA TAGGAAGTCT GCAAAAAGTG TTATTGTAGT AAACCAAAAA
AATGGAGAGC GAAGTGAATT AGAAAGTAAC TTAATAATAC TATGTTCATC AACAATCCAA
ACAATTAGAA TTCTATTAAG TTCCGAAGAA AGTAATAATT CAAATGGTCT AATTGACCCC
TCTAATTCAT TAGGAATGAA CTTAATGGAT CATATATCAA CCTGTAGGTT TTTCAGTGTC
CCTATCGAGA AGAATTTCAA TGATTATTCA GATAAAAATA ATAATCATCT TTTAACAGGA
GCAGGTAGCT TCTTTATTCC CATCGGTAGA GACAGCTCAA CTAAAAAAAA CTTTGTTGGT
GGATATGGCA TCTGGGGAGG AATAGATAGA TTTGAACCAC CAGAAGTTTT TAAGAAATAT
AAAAACACAA AAACTGGGTT CCTTATTGGT CATGGAGAAG TACTCCCAAA TCAAAAAAAC
ACTGTTTCTC TCTCAAATAC CAATGATCTA TATGGTATTT CCATACCGCA CATATCAATA
GTTTGGCGTG AAAATGAGAA ACGAATGGTT TCAGAAATGA ACAGAATGAT TGAACTTATT
ATTAATTCTG GTAATGGCAA AATTATTCCA GTGAATGAGA TTCTCAAGAT TCCATTTACC
AAACAAATTT TAAGCAAATC AGTTGCTATT AAAAGCGATG CTCCACCCCC TGGTTACTAC
ATACATGAGG TAGGAGGAGC ACCAATGGGA AATGACAAAG GAAATAGTGT TTTAGACAAC
TGGAATCGTC TATGGGAATG CAACAATGTA TTAGTAGTTG ATGGAGCTTG CTGGCCTACT
TCATCTTGGC AAAGCCCAAC ATTAACAATG ATGGCAATAA CTAAGAGAGC TTGCGAAAAG
GCAATTAGAG ACTTTAAAGG TTAA
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| Protein sequence | MIDKPYEVII IGSGATGGMA ALTMAKAGVR VLVIERGPEL EIKQAKGTEP CNMIRRLLGV
TTGNYQNQPQ HPGFWKSNPL LYANKKANPY THPPKAPFMW TQGNQVGGRS LTWGGITLRL
SDEDFEASKE KEYNLEWPIS YKDLESHYSE IESFLKIYGN KDDLNQLPNG EYIGKLPFTE
SESRFASNIK KNLNLPFIHS RGFGPNEDQT KWPRYSSLGS TLKEAARLGK IEILSNHIVD
KLVLNKDRKS AKSVIVVNQK NGERSELESN LIILCSSTIQ TIRILLSSEE SNNSNGLIDP
SNSLGMNLMD HISTCRFFSV PIEKNFNDYS DKNNNHLLTG AGSFFIPIGR DSSTKKNFVG
GYGIWGGIDR FEPPEVFKKY KNTKTGFLIG HGEVLPNQKN TVSLSNTNDL YGISIPHISI
VWRENEKRMV SEMNRMIELI INSGNGKIIP VNEILKIPFT KQILSKSVAI KSDAPPPGYY
IHEVGGAPMG NDKGNSVLDN WNRLWECNNV LVVDGACWPT SSWQSPTLTM MAITKRACEK
AIRDFKG
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