Gene PMN2A_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0053 
Symbol 
ID3605422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp608419 
End bp609504 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content35% 
IMG OID637686908 
Productcell wall hydrolase/autolysin 
Protein accessionYP_291248 
Protein GI72381893 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG ATCAATCTTT AATGTCAAAA CTGGGATTGT TTGCGGGATT TATTTTTTGT 
TCCAATCTCT TTATTTCTTT ACCTCTAAGA TCTGCTAGTG CTCTTGCCGC TTGGGCCTTA
ACTAGCAACG GTAGTCTTAA ATTACGAACT TCCTCTGGGG CTAAATTAGA TGCTTTTTAT
CAATCCTCAA CTACTGATAA GGGTGATAGG GTTTGGATCG ATTTCACTGG AGAATTAAGC
CGCCCTAGGA CTATTAAAGG TAATGGATCA GTTAAGGAAA TCAGGCTAGG AAAACCCTCT
AAGGGTATAA CAAGGCTTGT TATTGAATTC CTGCCATCAG TAGAATTAGA ACCCTCAAAA
TTACAATTAA TTGGTATATC AACAAATACC TGGGAGTTGG AACTTATTGG TCTAGAAAGT
AATTCTTTTC GTCCGATTGA AGAAGGTAAT ATTCTAAGAA ACTCAATAAA AAGAACTTAT
GAAAAAATAA AGCCTGAAGA TTTAGATGTT TCTTCTTTAC CAAATGTACC CTATGGAAAG
TATAAAGTTG TTATCGATCC AGGGCATGGT GGCTCAGACC CTGGTGCTGT TGGAATTAAT
GGATTAAGAG AGACTGATAT TGTTTTAGAA GTGTCAAAGA GTGTTTCAGA TTTTCTAACA
AATAAAGGAG TTAAAACTAT TTTAACTCGG AATTATGAGA GAACATTAGA CTTACAGCCA
AGAGTTACCA AGGCTAATAA TTCAAAAGCA GATGTTTTTG TTAGTATTCA TGCAAATGCA
ACACGAGGTA AGAGAAAAGA AGTTAACGGC TTAGAGACCT ATTATTACTC TGGTTATAAA
GGCTATTCTT TAGCAAAAAA TATACAAAAA CAAATTTTGA TTGTTTCTCC GCAAAGTCCT
GATAGGGGTG TTCGTAGATC ACGCTTTTAT GTGATAAGAA AAACATCAAT GCCTGCAGCT
TTAGTAGAAA TTGGATTTGT TACTGGTATG TATGACGCCG ATTTGTTACG ACAAAAAGTT
TATAGGGATA AAATGTCTTT TGCTATTGCT AGGGGAATAC TTAACTATCT AAAAATTTCA
AATTAG
 
Protein sequence
MFKDQSLMSK LGLFAGFIFC SNLFISLPLR SASALAAWAL TSNGSLKLRT SSGAKLDAFY 
QSSTTDKGDR VWIDFTGELS RPRTIKGNGS VKEIRLGKPS KGITRLVIEF LPSVELEPSK
LQLIGISTNT WELELIGLES NSFRPIEEGN ILRNSIKRTY EKIKPEDLDV SSLPNVPYGK
YKVVIDPGHG GSDPGAVGIN GLRETDIVLE VSKSVSDFLT NKGVKTILTR NYERTLDLQP
RVTKANNSKA DVFVSIHANA TRGKRKEVNG LETYYYSGYK GYSLAKNIQK QILIVSPQSP
DRGVRRSRFY VIRKTSMPAA LVEIGFVTGM YDADLLRQKV YRDKMSFAIA RGILNYLKIS
N