Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_89732 |
Symbol | MAE1 |
ID | 4839210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 423556 |
End bp | 425732 |
Gene Length | 2177 bp |
Protein Length | 638 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640390525 |
Product | mitochondrial malate dehydrogenase |
Protein accession | XP_001384743 |
Protein GI | 150865502 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTCGTTTTCG TTTCTGTTAG AGTTTGTTGT ATATCACTTA CACCTTGTCT TCCATAGGAA TCATCTGATC CACTGCTATT TATTTTTGTC ACGATTGCCA AATTGGTCAA ATTTTGAAAG GTTGAGAAAT TGTCCAATTC CACGATTTCA TCCCTTTAGC CTCAAGTGAA AGTTATTTCA AAATCGCGAT AATCAGCTAT CTGATCAGAA TCGCGTTCAA CTTTTGATAA CACATCATTT CTTCAATTTT CACATCTCCA ATGTTGAAGA CTATATCCAA ACTGGCCCCT CGTGGGTATT TGCGCATTCT GGTAAGATAC AATTCTGCCA CAGCTACGAA TGCTTCCACG AACAAGCCAA ATGCCTCTAT TCATACCCAC ACAATCAAGA CGCCTGTGGG CATCAAAGCT GCCATTGCCT CGTTGAAGCC TAAAACGACA AGATTGTCTA TTGAAGGACC CATTGAGTGT GATTTGGAAG GCTTTCAATT GCTCAATTCG CCCATTTTCA ACAAGGGTTC TGCCTTCACA AATGAAGAAA GACAAGCTTT TAAGTTGGAC GGGCTTCTTC CATCGCAAAT CAACACTTTG GACGAACAGG TGGAAAGGGC CTATGCCCAG TTTTCGTATT TGAAAACTCC CTTGGCCAAG AACGATTTCT GTACATCCAT GAGAATCCAG AACAAGGTAT TATACTACGA ATTGGTGAGA AGACACATCC GTGAAATGTT GCCCATCATC TATACTCCTA CAGAAGGAGA TGCCATCGCT GCTTACTCAA ATAGATTCAG AAAGCCAGAG GGATGTTTCT TGGATATCAC CGATGCAGAC TCTATAGATG AGAGATTGTC AGTTTACGGT GAAGACAAGG ATATTGATTA CATTGTGGTA TCTGATGGAG AAGGTATTTT GGGTATTGGT GATCAGGGTG TAGGAGGAAT CAGAATTGCC ATTGCCAAGT TGGGCTTAAT GACTCTCTGT GGAGGTATTC ATCCCGGAAG AGTGTTACCG GTCGTTTTTG ATGTAGGAAC AAACAACGAA AAGTTGCTCA ATGACGAATT GTACATGGGA AACAAGTTTC CTAGAGTCAG AGGTGAAGAA TACTGGGATT TCGTAGATAA GTTCATTCAA GCTGTCAAAA AGAGATTTCC TAGCGCAGTC TTGCATTACG AAGATTTCGG TGTTTCTACT GGTAGAGACA TGTTGTACAA ATACAGAGAA ACATTGCCTT CATTCAACGA CGATATCCAG GGCACTGGTG CTGTGGTGAT GGCTTCTATC ACTGCTGGTT TACAATTTAC CAACAAGAAG TTGTTGGACA CAAAGGTCGT AATCTACGGA GCAGGTTCTG CCGGTTTAGG AATTGCTGAC CAGATTGTCA ACCACATGGT TTCCCACGGT GCTACTCCAG AATATGCTAG ATCTCGTATC CACTGTATGG ATCGTCGTGG TTTGATCTTG GAATCATACG AGGGATCAAC TCCTACTCAG CAGTTGTATG CGGACAAGGA TGCTGATTGG GAAGGTGTAG ATACCAAAAG CTTGGTGGAA GTCATTGACA AGGTACAACC CACCGTTTTG GTTGGATGCT CTACTCAAGC TGGCGCCTTC ACTGAAGAAG TCATCAAGAC GATGTACAAG CACAATCCCC AGCCAATGGT TTTCCCATTG TCGAATCCTA CCAGATTGCA CGAAGCTTTC CCTGTAGACA TCATGAAGTG GACTGAAAAC AATGCATTAA TTGCCACCGG ATCGCCATTC CAACCTGTGG ATGGCTACTA CATCTCTGAA AACAACAACT GTTTCACATT CCCTGGAATT GGTTTGGGCG CTGTTTTGTC CAGATGTACC ACCATTTCTG ACAAGATGGT TTCTGCTGCT GTCGACCAAT TGGCCTCGTT GTCGCCAAAG ATGGAAAACC CAAAGAACGG GTTGTTGCCC AAATTGGAAG AAATCGATGA AGTCAGTGCC CAAGTGGCCA CGGCTGTTAT CTTGCAATCG TTAAAGGAAG GTACTGCCAG AGTCGAAAGC GAAAAGAAGC CCGATGGAGG CTTTGTTGAA GTTCCTAGAG AGTTCAACAA GTGTCTTAAG TGGGTGCAAT CGCAAATGTG GAAGCCTATC TACAGACCAC TTGTCAAGGT GGAACATGTT CCAGAAATCC ATACCTACCA AGTGTAG
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Protein sequence | MLKTISKSAP RGYLRISVRY NSATATNAST NKPNASIHTH TIKTPVGIKA AIASLKPKTT RLSIEGPIEC DLEGFQLLNS PIFNKGSAFT NEERQAFKLD GLLPSQINTL DEQVERAYAQ FSYLKTPLAK NDFCTSMRIQ NKVLYYELVR RHIREMLPII YTPTEGDAIA AYSNRFRKPE GCFLDITDAD SIDERLSVYG EDKDIDYIVV SDGEGILGIG DQGVGGIRIA IAKLGLMTLC GGIHPGRVLP VVFDVGTNNE KLLNDELYMG NKFPRVRGEE YWDFVDKFIQ AVKKRFPSAV LHYEDFGVST GRDMLYKYRE TLPSFNDDIQ GTGAVVMASI TAGLQFTNKK LLDTKVVIYG AGSAGLGIAD QIVNHMVSHG ATPEYARSRI HCMDRRGLIL ESYEGSTPTQ QLYADKDADW EGVDTKSLVE VIDKVQPTVL VGCSTQAGAF TEEVIKTMYK HNPQPMVFPL SNPTRLHEAF PVDIMKWTEN NALIATGSPF QPVDGYYISE NNNCFTFPGI GLGAVLSRCT TISDKMVSAA VDQLASLSPK MENPKNGLLP KLEEIDEVSA QVATAVILQS LKEGTARVES EKKPDGGFVE VPREFNKCLK WVQSQMWKPI YRPLVKVEHV PEIHTYQV
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