| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89695 |
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| Symbol | SCW4.1 |
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| ID | 4839647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1290416 |
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| End bp | 1291931 |
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| Gene Length | 1516 bp |
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| Protein Length | 369 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640390962 |
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| Product | Soluble Cell Wall protein |
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| Protein accession | XP_001385252 |
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| Protein GI | 126137457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CCTATAGTCA CTCCTTTACA TCCCTAGTTA ATACCAGCCG TCCGTATACT TACACTCCTT
AGACCATGTT GTTCAAGTCC ATCGTTCAAG CTGCCCTCGT AGCCTCGGCC ATTGCTGCTC
CTTTGCAAGA GCACAAGCAT CACCAACACA AGCAAGAGAA GAGAGAAGTC AAGGTCGTCA
CCCAGACTTC CGTTGTTGTC GTCACCTTGG GTGCCGGTGA CTTGACCACT ACCTTGCCTC
AAGTTACCAT CAACCCTGCC ACTGGTGTCT CTGTCAACAC TGACTACACT CCAATTCCTC
AAGAACACCC AGCCTCGTTC TCTAACCCTG AATCCTTTGA ATCCGCCACT CCAGCCTCGA
CTTCCCCAGC TTCCACCAGC ACTGCCTCCA CTGGCGGTGA CTTTGGTGCT GGTGCCAAGG
GTATCACTTA CACTCCTTAC TCTAATGACG GTGGTTGTAA GCCTGCCTCT CAGATTGCCT
CTGAAGTTGC TCAATTATCT GGTTACTCCG TCATTAGATT GTACGGTGTC GACTGTGACC
AGGTCAACGC TGTCTTAAGT GCTAAGGCCC CAAGCCAAAA GATCTTTGCT GGTATCTATG
ACGTTTCCAA CATCGCTAGT GGTATTCAAA CCTTGGTTTC TGCCGTCAAC GCTAACGGTG
GCTGGGACAA TGTCCACACC GTCTCTATTG GTAACGAATT GGTCAACTCT GGCCAAGCCT
CTCCTGCTCA AATCAAGGGA TACGTCTCTC AAGGTAAGAG CTTGTTGTCT GCTGCCGGTT
ACTCCGGTCC TGTTGTTTCT GTCGACACCT TCATTGCCGT CATCAACAAC CCAGAATTGT
GTCAATACTC CGACTACATG GCTGTCAACG CCCACGCCTT CTTTGACGGT TACTACACCG
CTGACCAAGC TGGTGACTGG GTTCTTTTGC AGATCCAAAG AGTGTGGAGC GCCTGTGGTG
GTAAGCAGAA TGTTTTCGTC ACCGAAACCG GCTGGCCATC CAAGGGTGAC ACCAACGGTG
TTGCCGTCCC TTCAAAGCCA AACCAAGAAG CTGCCATCAG CTCCATCAAG TCTAAGTGTG
GTGATTCCTC CATTCTTTTC ACTGCCTTCA ACGACTTGTG GAAGGCTGAC GGTGCTTTCA
ATGCTGAAAA GTACTGGGGT ATCTTGTCTA ACTAAATGCC CTAACTGGTT TTCATTCATT
GGTTTCTATT GGTTAAAAAG CATATAAAAA GTTGGGATCG TTGCTCTCTC TTAGTCTTTA
CCCTTTCTTT CACTTCGTAT TTTCATCTTT CATACGTATT ATCATCTCCA ATGTCCTTCG
TTTTTATATT ATTCCACCAT CATATGATCA ACTACATTCA TTTACTGACT ACAAGGACAG
CTGTTTAACT ATTGTTTACC ATTTGAAAAA AAAGTCGACT TCAGGTCAAC GCTTGTTGTC
TTCTTGGGCT TCGGCTCAAG TTTTTTTTTT GATACCTATA TAATGTAGTA TAATTTGAAT
GTATACTACA TTGCTG
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| Protein sequence | MLFKSIVQAA LVASAIAAPL QEHKHHQHKQ EKREVKVVTQ TSVVVVTLGA GDLTTTLPQV
TINPATGVSV NTDYTPIPQE HPASFSNPES FESATPASTS PASTSTASTG GDFGAGAKGI
TYTPYSNDGG CKPASQIASE VAQLSGYSVI RLYGVDCDQV NAVLSAKAPS QKIFAGIYDV
SNIASGIQTL VSAVNANGGW DNVHTVSIGN ELVNSGQASP AQIKGYVSQG KSLLSAAGYS
GPVVSVDTFI AVINNPELCQ YSDYMAVNAH AFFDGYYTAD QAGDWVLLQI QRVWSACGGK
QNVFVTETGW PSKGDTNGVA VPSKPNQEAA ISSIKSKCGD SSILFTAFND LWKADGAFNA
EKYWGILSN
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