Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_88266 |
Symbol | |
ID | 4838235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1205483 |
End bp | 1206276 |
Gene Length | 794 bp |
Protein Length | 222 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389550 |
Product | predicted protein |
Protein accession | XP_001383859 |
Protein GI | 150864864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.130438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AATATGTTCT TTTCCTTGCC CTCTCAATCA CATTTTGTTC AATAGCAATA TGGCTCCACA CACCAGACAA GCAACTGCCA CTATTGAAGA CGACCAGGAT TTGCTAGTTC CAGTCCACGA CCATAAGAAA AGGCATTTGG ATGTTAGAGA TGTTGTTGAG ATCAGATCGT CTCCTTACTA CGATAAGAGC CACTGGTTGG ATTTGAAAAC CCTTGAAGAG CCTTACAAAG TGCTCGCTTT GGCATTACAG TCTTTCCAAC CGGTTACGGA GAAGTATGCT TTCGATCCCT ACCAGGAAGC GTTCAACATC TCTGAAGTGA TCGAGCTTGC GAAGGATTAC TCCAAACAAC TACAAGTGGA TTTTCCCAAA ACTACACTTT ACGTCATTGC ATTCAGATCA ATTTTGTACG CGGAAGTCCA AGCTTCCGCA GAGAAGAGAC AGTTTCTAGC AAAAGTAGAC AATGATTCCC ATATAGAAGC CAACGTATCT GGAGGGCTCT TGAAATATTG GTTTGGAACT CCAGACGATG TTCACGGCCA GAATCTTGCA ACCTGTTGGT GGGTGAGCAA ACAGCATGCA AAAAATGGGG GAGGTGGTGA AGCCCATAGG CTGGGAATGA AGGCTGTCCG ACTGTGGTTC GAACACTGGC AGGTAGAGGA GTACGAGTTG ATCATAGAAA AAGACATAGC GTCATACAAC TTCAATAGAG TGGCATAGTT TAGATAGGAA CAATTTTGCT GCAAGGATTT TTCTCGCCGA AGATAAGGCT AAAAAATAAA CGTAAAGTTC ACGT
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Protein sequence | MAPHTRQATA TIEDDQDLLV PVHDHKKRHL DVRDVVEIRS SPYYDKSHWL DLKTLEEPYK VLALALQSFQ PVTEKYAFDP YQEAFNISEV IELAKDYSKQ LQVDFPKTTL YVIAFRSILY AEVQASAEKR QFLAKVDNDS HIEANVSGGL LKYWFGTPDD VHGQNLATCW WVSKQHAKNG GGGEAHRSGM KAVRSWFEHW QVEEYELIIE KDIASYNFNR VA
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