Gene PICST_88102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_88102 
Symbol 
ID4837440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1600459 
End bp1601075 
Gene Length617 bp 
Protein Length174 aa 
Translation table12 
GC content39% 
IMG OID640388755 
Productpredicted protein 
Protein accessionXP_001383084 
Protein GI150864317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.806878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TACAATTACA ACTTCGATAA TTCTCTTCCA CTTATAGTGC AATTATACAA ATGTCATATA 
CCGAAATAAC GAAGCCAGAA ATTGTGGCTA CACCAAAATC TACAAAGAAG CCCTTGGTGC
TCCCTCCAGG GTTTGGTCAG GATGGAAAAT CTGCTTCAGG TAAGACTAAG AAGGTTCTGT
TCAAGAACGG TGATGAGCAG ATGGAGGAAT TGAAGGTAAA AAAGGCATGG GAGTTGGCAA
CTGGTCCTGC TAAGTCCATA CCGATGAATG CCATCATGAG TTATATGACT GGTAACTCGT
TACAGATCAT TCCAATGACT ATGACATTAA TGTTATTGTG GAACCCTTTG AAAGCCATTT
TCACAGAAAC CAACGACACT TTCAAAGGTT TGATCACTAA GAAAAACTCG TCCAATATAT
TATTGGCCAA ATTGGGATTT GTTTTCTTCC AGTTACTTAA CATGTCTATT GGGATCTACA
AGTTATATAC CATGGGACTC ATTCCTAACA CAGAGGCAGA TTGGCTTGCC TGGAAAGAGT
TGAAGTCTTT TGATGAAAGG TTGTCTTTTT ATTAGACTAT GTACGATGCC ATGCGATTCA
TATATGTATA ATACAAC
 
Protein sequence
MSYTEITKPE IVATPKSTKK PLVLPPGFGQ DGKSASGKTK KVSFKNGDEQ MEELKVKKAW 
ELATGPAKSI PMNAIMSYMT GNSLQIIPMT MTLMLLWNPL KAIFTETNDT FKGLITKKNS
SNILLAKLGF VFFQLLNMSI GIYKLYTMGL IPNTEADWLA WKELKSFDER LSFY