| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86924 |
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| Symbol | XYL2 |
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| ID | 4852013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3415943 |
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| End bp | 3417177 |
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| Gene Length | 1235 bp |
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| Protein Length | 363 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640393721 |
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| Product | D-xylulose reductase (Xylitol dehydrogenase) (XDH) |
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| Protein accession | XP_001386982 |
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| Protein GI | 126276306 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCTCACTTTA GTTTGTTTCA ATCACCCCTA ATACTCTTCA CACAATTAAA ATGACTGCTA
ACCCTTCCTT GGTGTTGAAC AAGATCGACG ACATTTCGTT CGAAACTTAC GATGCCCCAG
AAATCTCTGA ACCTACCGAT GTCCTCGTCC AGGTCAAGAA AACCGGTATC TGTGGTTCCG
ACATCCACTT CTACGCCCAT GGTAGAATCG GTAACTTCGT TTTGACCAAG CCAATGGTCT
TGGGTCACGA ATCCGCCGGT ACTGTTGTCC AGGTTGGTAA GGGTGTCACC TCTCTTAAGG
TTGGTGACAA CGTCGCTATC GAACCAGGTA TTCCATCCAG ATTCTCCGAC GAATACAAGA
GCGGTCACTA CAACTTGTGT CCTCACATGG CCTTCGCCGC TACTCCTAAC TCCAAGGAAG
GCGAACCAAA CCCACCAGGT ACCTTATGTA AGTACTTCAA GTCGCCAGAA GACTTCTTGG
TCAAGTTGCC AGACCACGTC AGCTTGGAAC TCGGTGCTCT TGTTGAGCCA TTGTCTGTTG
GTGTCCACGC CTCTAAGTTG GGTTCCGTTG CTTTCGGCGA CTACGTTGCC GTCTTTGGTG
CTGGTCCTGT TGGTCTTTTG GCTGCTGCTG TCGCCAAGAC CTTCGGTGCT AAGGGTGTCA
TCGTCGTTGA CATTTTCGAC AACAAGTTGA AGATGGCCAA GGACATTGGT GCTGCTACTC
ACACCTTCAA CTCCAAGACC GGTGGTTCTG AAGAATTGAT CAAGGCTTTC GGTGGTAACG
TGCCAAACGT CGTTTTGGAA TGTACTGGTG CTGAACCTTG TATCAAGTTG GGTGTTGACG
CCATTGCCCC AGGTGGTCGT TTCGTTCAAG TCGGTAACGC TGCTGGTCCA GTCAGCTTCC
CAATCACCGT TTTCGCCATG AAGGAATTGA CTTTGTTCGG TTCTTTCAGA TACGGATTCA
ACGACTACAA GACTGCTGTT GGAATCTTTG ACACTAACTA CCAAAACGGT AGAGAAAATG
CTCCAATTGA CTTTGAACAA TTGATCACCC ACAGATACAA GTTCAAGGAC GCTATTGAAG
CCTACGACTT GGTCAGAGCC GGTAAGGGTG CTGTCAAGTG TCTCATTGAC GGCCCTGAGT
AAGTCAACCG CTTGGCTGGC CCAAAGTGAA CCAGAAACGA AAATGATTAT CAAATAGCTT
TATAGACCTT TATCCAAATT TATGTAAACT AATAG
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| Protein sequence | MTANPSLVLN KIDDISFETY DAPEISEPTD VLVQVKKTGI CGSDIHFYAH GRIGNFVLTK
PMVLGHESAG TVVQVGKGVT SLKVGDNVAI EPGIPSRFSD EYKSGHYNLC PHMAFAATPN
SKEGEPNPPG TLCKYFKSPE DFLVKLPDHV SLELGALVEP LSVGVHASKL GSVAFGDYVA
VFGAGPVGLL AAAVAKTFGA KGVIVVDIFD NKLKMAKDIG AATHTFNSKT GGSEELIKAF
GGNVPNVVLE CTGAEPCIKL GVDAIAPGGR FVQVGNAAGP VSFPITVFAM KELTLFGSFR
YGFNDYKTAV GIFDTNYQNG RENAPIDFEQ LITHRYKFKD AIEAYDLVRA GKGAVKCLID
GPE
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