Gene PICST_85951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85951 
SymbolFBA1 
ID4851295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1433434 
End bp1434581 
Gene Length1148 bp 
Protein Length359 aa 
Translation table 
GC content49% 
IMG OID640393003 
Productfructose-bisphosphate aldolase 
Protein accessionXP_001387503 
Protein GI126274281 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01520] fructose-bisphosphate aldolase, class II, yeast/E. coli subtype 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TATTTGCAAT TGCTCCACTA CTACTATGTC TGCTCCAGCT GTGTTAAAGA AGTCCGGTGT 
CATCTACGGT GACGACGTCA AGGAACTTTT CCTCTACGCC CAGGCCAAGG GCTTTGCTAT
CCCAGCCATC AACGTCACTT CGTCGTCGAC AGTTGTCGCT GCCTTGGAGG CTGCCAGAGA
CAACAAGTCT CCAATTATCT TGCAAACTTC CCAAGGTGGT GCTGCCTACT TTGCCGGTAA
GGGTGTTGCC AACAAGAACC AGGAAGCCTC GATTGCCGGT TCGATCGCTG CTGCCCACTA
CATTACCTCC ATTGCCCCAA CCTACGGTAT CCCCGTTGTG TTGCACACTG ACCATTGTGC
CAAGAAGCTC TTGCAATGGT TCGACGGCAT GTTGGAAGAA GACGAAAAGA CTTTCGCTGC
CACCGGTAAG CCTTTGTTCT CCTCCCACAT GTTGGACTTG TCAGAAGAAT CTGACGACGA
AAACATCGCT ACCTGTGTCA AGTACTTCAA AAGAATGGCC AAGTTGGGCC AATGGTTGGA
AATGGAAATC GGTATCACCG GTGGTGAAGA AGACGGTGTC AACAACGAAA ACGTCTCCAA
GGACGCTTTG TACACCTCTC CAGAAACCGT CTTCAAGGTC CACGAAGCCT TGGCTCCTAT
CTCGCCAAAC TTCTCCATCG CTGCTGCCTT CGGTAACGTG CATGGTGTCT ACAAGCCAGG
TAACGTCCAA TTGAAGCCAG AAATCTTGGG TGACCACCAA GCTTACGCTA AGAAGCAAAC
CGGCTCTTCC TCTGCTCATC CATTGTTCTT GGTTTTCCAC GGTGGTTCCG GTTCTACCCA
GCAAGAATTT GACACCGCCA TCAAGAACGG TGTCGTTAAG GTCAACTTGG ACACTGACTG
TCAGTACGCC TACTTGACCG GTATCAGAGA CTATGTTTTG AACAAGAAGG ACTACATCTT
GTCGCAAGTC GGTAACCCAG ACGGTGAAGA CAAGCCAAAC AAGAAGTACT TCGACCCAAG
AGTTTGGGTT AGAGAAGGTG AAAAGACCAT GTCGGCCAGA ATTGCCGAAG CCTTGGCAAT
CTTCCACACC AAGGACCAAT TGTAGGTTTA TAATTCTTTA TGTATTTATT GAATGAGTTC
TAGGATAT
 
Protein sequence
MSAPAVLKKS GVIYGDDVKE LFLYAQAKGF AIPAINVTSS STVVAALEAA RDNKSPIILQ 
TSQGGAAYFA GKGVANKNQE ASIAGSIAAA HYITSIAPTY GIPVVLHTDH CAKKLLQWFD
GMLEEDEKTF AATGKPLFSS HMLDLSEESD DENIATCVKY FKRMAKLGQW LEMEIGITGG
EEDGVNNENV SKDALYTSPE TVFKVHEALA PISPNFSIAA AFGNVHGVYK PGNVQLKPEI
LGDHQAYAKK QTGSSSAHPL FLVFHGGSGS TQQEFDTAIK NGVVKVNLDT DCQYAYLTGI
RDYVLNKKDY ILSQVGNPDG EDKPNKKYFD PRVWVREGEK TMSARIAEAL AIFHTKDQL