Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85478 |
Symbol | |
ID | 4841093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 227192 |
End bp | 228290 |
Gene Length | 1099 bp |
Protein Length | 358 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640392408 |
Product | predicted protein |
Protein accession | XP_001386640 |
Protein GI | 126140236 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.260132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGCTATTGCA AATATATATT CAATGTCTGC CATTGCTATC AAGCCCTCAC TACTTAGAGC TGCCAAGACA TCAGCTCCAC GCTTTTCTAG AGCTGCCTGG TTGGCTGCTG GTTTGGTTGG TACTGCTGGT ACAGCCACTT ACTTGTACAG CAATTCCAAC AACTCCAACT CTAACAATTC CAACAATGCC GGCAAAAAGT TGTCCACCTT GATGGCTGGA GTTCTCGGCG CTAATGTTGC TACTGTTCCT CAAGGAAAGA CATTGAAGGA CTACCAAGAA GTCTACAACG ACATCGCTGC TAAGATTGAA GAGAACCTCG ACTACGATGG TGGTGCTGGT TTCTACGGTC AATTGGTCAG ATTGGCATGG CATTCGTCTG GTACCTACGA TAAGAACACC AAGACTGGTG GTTCTTACTA TGGTACAATG ATTTTCTACC CAGAAGCCTC CGACGGAGCA AACAACGGTT TGGCCAACGG CCGTGACTTC TTGTACGAAT TTGCTGTCAA GTATCCATGG ATCTCCAGAG GTGACTTATG GACCTTGGGA GGTGTTGTTG CCGTCCAGGA ATCTGGCGGT CCAAAGATCC CATGGAGACC AGGTAGAGTT GACTCCTACG AAAAGAAGGA CATTCCTGAA AACGGTAACT TGCCAGATGC CAGTCAGGAC GGTAAGTATG TGAGAAATTA CTTCAAGAGA TTGGGTTTTG GTGATAGAGA AATCGTTGCA TTGTTAGGTG CTCACTGTTT GGGTAAGTGC CACCCTGAAA ACTCTGGTTA CGACGGTCCA TGGGGTCCAT CGTTCAACAT GTTCACCAAC GACTTCTTTG TTAGATTGTT GGGCAGCTGG CATGTGAGAC AATGGGATGG TGAAAAGCAA TACGAAGACG ACGAAACCAA CTCGTTCATG ATGTTACCTA CCGATATTGC TTTGAAGGAA GAGTCGTACT TCTTGAAGTA CGTCAAGTTG TACGCTGCTG ACCAGGACTT ATTCTTTGCT GATTTCTCAA AGGCTTTCGC TACCTTGTTG GAATTGGGTA TTGAGTACCC AAGAGGCACC AAGCCATTCC TCTTCAAGAC TGTTGAAGAA CAAGAATAG
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Protein sequence | MSAIAIKPSL LRAAKTSAPR FSRAAWLAAG LVGTAGTATY LYSNSNNSNS NNSNNAGKKL STLMAGVLGA NVATVPQGKT LKDYQEVYND IAAKIEENLD YDGGAGFYGQ LVRLAWHSSG TYDKNTKTGG SYYGTMIFYP EASDGANNGL ANGRDFLYEF AVKYPWISRG DLWTLGGVVA VQESGGPKIP WRPGRVDSYE KKDIPENGNL PDASQDGKYV RNYFKRLGFG DREIVALLGA HCLGKCHPEN SGYDGPWGPS FNMFTNDFFV RLLGSWHVRQ WDGEKQYEDD ETNSFMMLPT DIALKEESYF LKYVKLYAAD QDLFFADFSK AFATLLELGI EYPRGTKPFL FKTVEEQE
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