Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85252 |
Symbol | GLC7 |
ID | 4840532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 433158 |
End bp | 435172 |
Gene Length | 2015 bp |
Protein Length | 328 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391847 |
Product | protein phosphatase type I |
Protein accession | XP_001386284 |
Protein GI | 126139523 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.551295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TCACTCATCT CCATCTCGTC GGTCATCCCT CCCGCTGTGT TGCCCCACCG AACCTTCCAT TTGTTCCTGA GTTCTCTGAC TGATTAACAG CTACAAAAAC AGTAACATTC TATTTGTCAA CCTCCCTACA GTTGTTTCAC ATCTGACCAG TCACTGCTTT CGAACTGTTC ACAGCCATAT CAACGCATAT TCACACCTGA CAGTATCACC ACACCAAGTG TCTATATCGA TACCGACTTC TCCACCGATA GCACCTTTAA CTGTTCACTA GTATTCTCGT TCCGTTAACT TGATAATTCT CACTTCTCAG ATCCCTCATT TTTGTTGTGA ATTTTGAATT TTTCCCCAAC CGCCCTCACG GAATTTTGTT TTTTCGAGTG CCACCACTTT ATCTCCACAT CACACTCCCG TAGCCACACA ACTCCACCAT GTCTGCCGAC CACCAGGAAG CCGACATCGA TTCCATAGTC GATAGATTGC TAGAAGTCCG CGGCTCCAGA CCAGGTAAAC AAGTCACCTT GTTGGAACAC GAAATCCGTT ACTTGTGCAC CAAAGCCAGA GAGATCTTCA TCCAGCAGCC CATCTTGTTG GAGCTCGAAG CGCCAATCAA GATCTGTGGC GATATTCACG GCCAGTACTA CGACTTGTTG CGACTCTTCG AATACGGCGG TTTCCCCCCA GAAGCCAACT ACTTGTTCTT GGGAGACTAC GTTGACAGAG GTAAACAGTC GTTGGAAACG ATCTGTTTGC TCTTAGCGTA CAAGATCAAA TACCCCGAGA ACTTTTTCAT CTTGAGAGGA AACCACGAGT GTGCCTCTAT CAACAGAATC TACGGGTTTT ACGACGAATG TAAAAGAAGA TACAATATCA AGTTGTGGAA GACGTTTACC GACTGCTTCA ACTGTTTGCC CATCGCCGCC ATCATCGACG AAAAGATCTT CACCATGCAT GGAGGTTTAT CTCCGGACTT GAACTCCATG GAACAAATCA GAAGAGTCAT GAGACCAACC GATATCCCAG ATGTGGGGTT GTTATGTGAC TTGTTATGGT CCGATCCTGA TAAGGATATT ACAGGATGGT CAGAAAACGA CAGAGGTGTC TCGTTCACGT TTGGACCGGA CGTCGTATCG CGATTCTTGC AAAAACACGA CATGGATTTG ATCTGTCGTG CCCATCAGGT CGTAGAAGAT GGTTATGAGT TCTTCTCTAA GAGACAATTG GTGACGTTAT TCTCGGCTCC TAACTACTGT GGTGAGTTCG ACAATGCTGG TGCCATGATG AGCGTAGACG AAAGCTTGTT GTGTTCGTTC CAAATCTTAA AGCCAGCCGA TAAGAAGCCA AGGTATCCTC CTTCGGCAGG CGCCAATAAT AGACCTGGTG CTACTCCAAG AAAGCCTAAG AAGACCGGAA AGTAACCTTC CAGCCCTTCT GCTTATAAAT TCACATCCCA GTCATACATA TCTTCACGAG TCATTTGTCG TTCCTTATCA TCTTGTTAAA TTAAATTTAG TGATTTCATT CTCTTTCACG CATTTGAAAT GAAACCAACC CCAACTGCTA ACCTTCACTA CGAAATTGTA CAGCACCACC CTTCACAATT CTGTCATTGT GTTGTAATCT GGGTCGTATT CCTGTTCGAT TGATCTTTTT TGTTATTGTT ATCGTTTGAT TCCTATTCTG GTTCTTCTAT TATAGAATGG ATTCTTGTAC ATTATATATC ATTACCCAGC ATAACCATCT CGAACATCAT CGGAACCAGG TCTACTGCCG GACACAGGCC CATTACATAT AGACGTAAGC TAAATCTCGG ATATATAGTT CTCAATTTGT ATACACTCGC ATATATAGTT GCTGTTGTCT CTCCGGTTGC ATTTGGAAAG CATGCTACGA AAGAAGAAGA AGTTTGCAAG GTGGAACCGC TTTTGCCTCA CATCCTTTAT TTCTTGTCTT ATCATTATTA TCATTATTAT AGTATTTAGT ATCTTTATAG TATTAAGAAT CATTTTACAT ACTAG
|
Protein sequence | MSADHQEADI DSIVDRLLEV RGSRPGKQVT LLEHEIRYLC TKAREIFIQQ PILLELEAPI KICGDIHGQY YDLLRLFEYG GFPPEANYLF LGDYVDRGKQ SLETICLLLA YKIKYPENFF ILRGNHECAS INRIYGFYDE CKRRYNIKLW KTFTDCFNCL PIAAIIDEKI FTMHGGLSPD LNSMEQIRRV MRPTDIPDVG LLCDLLWSDP DKDITGWSEN DRGVSFTFGP DVVSRFLQKH DMDLICRAHQ VVEDGYEFFS KRQLVTLFSA PNYCGEFDNA GAMMSVDESL LCSFQILKPA DKKPRYPPSA GANNRPGATP RKPKKTGK
|
| |