Gene PICST_85252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85252 
SymbolGLC7 
ID4840532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp433158 
End bp435172 
Gene Length2015 bp 
Protein Length328 aa 
Translation table12 
GC content43% 
IMG OID640391847 
Productprotein phosphatase type I 
Protein accessionXP_001386284 
Protein GI126139523 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.551295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCACTCATCT CCATCTCGTC GGTCATCCCT CCCGCTGTGT TGCCCCACCG AACCTTCCAT 
TTGTTCCTGA GTTCTCTGAC TGATTAACAG CTACAAAAAC AGTAACATTC TATTTGTCAA
CCTCCCTACA GTTGTTTCAC ATCTGACCAG TCACTGCTTT CGAACTGTTC ACAGCCATAT
CAACGCATAT TCACACCTGA CAGTATCACC ACACCAAGTG TCTATATCGA TACCGACTTC
TCCACCGATA GCACCTTTAA CTGTTCACTA GTATTCTCGT TCCGTTAACT TGATAATTCT
CACTTCTCAG ATCCCTCATT TTTGTTGTGA ATTTTGAATT TTTCCCCAAC CGCCCTCACG
GAATTTTGTT TTTTCGAGTG CCACCACTTT ATCTCCACAT CACACTCCCG TAGCCACACA
ACTCCACCAT GTCTGCCGAC CACCAGGAAG CCGACATCGA TTCCATAGTC GATAGATTGC
TAGAAGTCCG CGGCTCCAGA CCAGGTAAAC AAGTCACCTT GTTGGAACAC GAAATCCGTT
ACTTGTGCAC CAAAGCCAGA GAGATCTTCA TCCAGCAGCC CATCTTGTTG GAGCTCGAAG
CGCCAATCAA GATCTGTGGC GATATTCACG GCCAGTACTA CGACTTGTTG CGACTCTTCG
AATACGGCGG TTTCCCCCCA GAAGCCAACT ACTTGTTCTT GGGAGACTAC GTTGACAGAG
GTAAACAGTC GTTGGAAACG ATCTGTTTGC TCTTAGCGTA CAAGATCAAA TACCCCGAGA
ACTTTTTCAT CTTGAGAGGA AACCACGAGT GTGCCTCTAT CAACAGAATC TACGGGTTTT
ACGACGAATG TAAAAGAAGA TACAATATCA AGTTGTGGAA GACGTTTACC GACTGCTTCA
ACTGTTTGCC CATCGCCGCC ATCATCGACG AAAAGATCTT CACCATGCAT GGAGGTTTAT
CTCCGGACTT GAACTCCATG GAACAAATCA GAAGAGTCAT GAGACCAACC GATATCCCAG
ATGTGGGGTT GTTATGTGAC TTGTTATGGT CCGATCCTGA TAAGGATATT ACAGGATGGT
CAGAAAACGA CAGAGGTGTC TCGTTCACGT TTGGACCGGA CGTCGTATCG CGATTCTTGC
AAAAACACGA CATGGATTTG ATCTGTCGTG CCCATCAGGT CGTAGAAGAT GGTTATGAGT
TCTTCTCTAA GAGACAATTG GTGACGTTAT TCTCGGCTCC TAACTACTGT GGTGAGTTCG
ACAATGCTGG TGCCATGATG AGCGTAGACG AAAGCTTGTT GTGTTCGTTC CAAATCTTAA
AGCCAGCCGA TAAGAAGCCA AGGTATCCTC CTTCGGCAGG CGCCAATAAT AGACCTGGTG
CTACTCCAAG AAAGCCTAAG AAGACCGGAA AGTAACCTTC CAGCCCTTCT GCTTATAAAT
TCACATCCCA GTCATACATA TCTTCACGAG TCATTTGTCG TTCCTTATCA TCTTGTTAAA
TTAAATTTAG TGATTTCATT CTCTTTCACG CATTTGAAAT GAAACCAACC CCAACTGCTA
ACCTTCACTA CGAAATTGTA CAGCACCACC CTTCACAATT CTGTCATTGT GTTGTAATCT
GGGTCGTATT CCTGTTCGAT TGATCTTTTT TGTTATTGTT ATCGTTTGAT TCCTATTCTG
GTTCTTCTAT TATAGAATGG ATTCTTGTAC ATTATATATC ATTACCCAGC ATAACCATCT
CGAACATCAT CGGAACCAGG TCTACTGCCG GACACAGGCC CATTACATAT AGACGTAAGC
TAAATCTCGG ATATATAGTT CTCAATTTGT ATACACTCGC ATATATAGTT GCTGTTGTCT
CTCCGGTTGC ATTTGGAAAG CATGCTACGA AAGAAGAAGA AGTTTGCAAG GTGGAACCGC
TTTTGCCTCA CATCCTTTAT TTCTTGTCTT ATCATTATTA TCATTATTAT AGTATTTAGT
ATCTTTATAG TATTAAGAAT CATTTTACAT ACTAG
 
Protein sequence
MSADHQEADI DSIVDRLLEV RGSRPGKQVT LLEHEIRYLC TKAREIFIQQ PILLELEAPI 
KICGDIHGQY YDLLRLFEYG GFPPEANYLF LGDYVDRGKQ SLETICLLLA YKIKYPENFF
ILRGNHECAS INRIYGFYDE CKRRYNIKLW KTFTDCFNCL PIAAIIDEKI FTMHGGLSPD
LNSMEQIRRV MRPTDIPDVG LLCDLLWSDP DKDITGWSEN DRGVSFTFGP DVVSRFLQKH
DMDLICRAHQ VVEDGYEFFS KRQLVTLFSA PNYCGEFDNA GAMMSVDESL LCSFQILKPA
DKKPRYPPSA GANNRPGATP RKPKKTGK