| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83457 |
|---|
| Symbol | |
|---|
| ID | 4838616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 1176846 |
|---|
| End bp | 1180341 |
|---|
| Gene Length | 3496 bp |
|---|
| Protein Length | 1108 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640389931 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384177 |
|---|
| Protein GI | 150865100 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.180127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTTTCTTGCT TCTTTCTTCA AGACTCGTAC TATCCCTGGA TTCATATCAT TATGGCTCCA
CACGCTTTAG CAGCCGAGTC GCTCAACGGA AGCGAAACTG CAAGTTTTGT AGAATTGGAC
TCCGCCAGCA GTGCTATTCT CAATGCTAGT CCTTTTGGAT CTACTGTCGA CCCCAACTTG
GTCAAAGGAA CTGCCTATAC TTCGCCTTCC ATTATTATAA ACCAGGCCAT CTACTCCATT
GCCACTAAGA TCTTCTCCTA CGAGACTGTT GGTGCTGAAA ACTTGTTGGA CTCTCATATT
CAACTCTGGG CCCAGAATTT CCATAGAGAA AATTCGTTTG GAGTAGTTCC ATTCTTCCAC
AAGTTACAGG TCAGATCTGG TGCATCCAAT GCGATCTTGG GTTACTTCAA GAAGAACGGA
ACCAGTGGTC AACCGGTCGC TACTTTGGTT GGTGCTAATG CCTTAACGTA TATGCGTACT
TCATTGGCCG GAAAGACAGC TGAAAGCTTA CCTTTAGCAT TCAATGTATC TGCTATTGAT
TATGATTCCG CTTCTGATTC GTTGGTCTCC AACTATATCA CTCCTTTGAG TGTTGCTCGT
TCTTTGGGCT ACGCTACTAT TACTCCTGTT AACTCTCAAT CTGGTTTGGA GTTGCAGCAC
GTGACGGTGT TGAACCACTA CTTGGTTTCG CTCATGGGTG TGCCTTCGTT GAATTTGTTT
GACGGTCCTG AATTCTCCAA GACCTTCTCT AAGTTCTCGC ACTTGCTTTC AGTAGAAGAT
GTTGGCAGAT TGTACCAGCA GTTATTGACT GCAACTACTG CCACTCCTAC CTCTTTAGAT
GAGGCTGTTG ACGTTGCCTT TGATACCTTG AACAGATTGA CAGGTCTGAC TTACTCCCAG
TTCGAATACT CAGGTGCACG TAACGCCACC ACTGTCTTCG TAGTCTACGG ATCCCATGAA
TCGACACAAG TTGGTGCCTT AATTGAAGCC GGTGTCCCAG GCGTAGGTTT GATCAAAGTC
AGAGTGCCAT TGCCTTTCAA TCAGGCCAAG TTTGTAGAAG CCATTCCAGC TTCCACCAGG
AAGTTAGTTA TCTTGTCTCA AACTGATGGT TCTGCTACTA GTTCTTTGAA GGCCGATGCT
ACTGCTGCTT TGTTCTTGAC TGGTAGATAC AGTGCTTTGT CTTTGGACGA GTTCTCCTAC
CCATTGAAAT TCGACTGGAC GCCTATTACT ATCTCCAAGA TTATCAGTGA GTTTGTTCCA
GATTTCAACC CCGAGCTGGT ATTGGCCCCT AGTGCTCTCC AGAGCTTTGT TGGACAGATC
ACTGCCAACA CCTCTCCCGT AGGAAAGTAC TTGATCTGGG GCAAGGACAA TGGCTCTTTC
GTAGGAACCG GCGATAAATT GGCTCTTTCG TTATCGTTGG ACGATTCGAA GACCGTCAGC
ATCAGAAACA AGTACGACAA CTCCAGAGCG GGTGGTGTTA TTCAGTCTTC GATTGCTACA
AACTTCAACA ACAACATTAT CGCTACCGTA GATTCTGCCG ACGTTGTCAT TATCGAAGAT
CTGTCTTTGT TGGCCAGCTA CGACGTCCTC GCCACTGCTG CCCCAGGAGG CACAGTTTTG
TTGGGAAACT TCAAGACTAT TAAGGAGTCT GTGGATATCG ACATTGTGGA AAAGTTGCCT
ATAGAATTCA GAAAGACTTT AGCCAGAAAC CACAACAAGT TGACTATTAT TGACTTCAGC
ATTGTTGACG AGTTAGACGA GTTGAACTCT TCCACCAAAG GATTTTCAGC AGACTTCTTA
GTCCAGTTGG CTTTCTGGAG GGCTGCTTTG CCTGAATTGG ATGGCTTTAT CGTCAACAAG
TTGTTACAGG CTAACGGTAA CTCGTTTGAG TTATTGGCTG CTGTCTTAGA CAAATTCATC
AACATTGCTG ACGAGAAGGC TGGTTTGAAG GAAGTGGCTG TATTGCCAGA ATGGGCTGAA
CTTGTAGAAG AAATCACGGA AGCAGAAGAA GCAGAAGAAG GCGAAAAGGA AGAAGAAACT
GAAGCCGCTG AAGCTGGCGA CGAAGAGGCC GCTGAAGAAG AAATTCCAGA AGCTTTGCCA
TTCTTCGTTT CGGAAACTTC TATCTTCCCC AACCCACGTA CTCCTCAAGA AGCTGCCGAA
GAAACCAAGT TGGTTGGCTA TAAACATTTG GCTAGCAAGT TGACTTTCCC AGAAGCATAT
AATACGAAGG AAGCTCTCAG ACCAGACTTG CCAGTCAAGA ATTTCGTAGT GAAGGTGCAA
GAAAACAAGA GACTCACTCC TCAAGAATAT TCTAGAAATA TCTTCCACAT TGAGTTCGAT
GTCACTGGCA CCGGCTTGAC TTACGATATT GGTGAAGCTC TTGGTATTCA CGGCCGTAAC
AATGCCGAAG CTGTTGAAAG CTTCTTGCAG TTCTACGGTG TGGATGGTGA CCAAATCGTT
GAAATCTCCA ACAAGGATGA TACCTCTCTT GTTGAGACCA GAACTGCCAG ACAGGCTTTG
ACTGACAGCG TTGACTTCTT GGGAAAGCCT CCCAAGAGAT TCTACGAGAG CTTGGCTGAG
TATGCTGAAA CTGAAGATGA CAAGAAGAAA TTGACTACAT TAGCCAATGC TGAAGGTGCT
GAGGAGTTGA AGAAGAGACA AGAAGTCGAT TTTGACTCTT ATGTTGATAT CTTGGAAGAA
TTTGCCTCTG CTCGTCCTCC TTTTGCTGAC TTGGTCAAGA TTATTGCTCC TTTGAAGAGA
AGAGAATACT CTATTGCTTC TTCTCAAAGA ATCCACCCTA ACGCGGTTCA CTTGCTTATC
GTTGTTGTAG ACTGGGTCGA CCCTCGTGGC AGAATCAGAT ACGGACACTG TTCCAAGTAC
TTAAGTGATT TGAAGATTGG CGACGAGTTG GTTGTCAGCG TCAAGCCTTC TGTTATGAAG
TTGCCTCCAT TGTCAACCCA ACCAATCATC ATGTCTGGTT TGGGTACTGG TTTGGCTCCA
TTCAAGGCTT TTGTCGAAGA AAAGATCTGG CAAAAGGAAC AGGGTATGGA AATTGGGGAA
ATCTTTTTAT TCTTGGGTTC CAGACACAAG AAAGAAGAAT ACTTGTACGG TGAATTATGG
GAAGCCTACA AGAGTGCTGG TGTTTTGACT CACATTGGTG CTGCCTTCTC TCGTGACCAG
CCTCAGAAGA TTTACATTCA AGACAAGATC AGAGAGAGCA TTGAAGACTT GACTGATGCT
GTGTGCTTGA AGGAAGGTTC GTTCTACTTG TGTGGTCCAA CATGGCCCGT TCCTGATATC
ACTGCTTGTC TTGAAGATAT TGTTAAAAAC GGTGCAAAGA GAGCCGGTCA AGAAATCAAA
GATGTCGCTA AGGTTGTTGA AGACATGAAG GAAGACGGCC GTTACATCTT GGAAGTTTAC
TAGACGGTAG TTGCTTTATA TAGAACTCTA GAAGTATGCA AATATGAACT ATTTATCAGA
TTAGAAGTTA TTATAT
|
|---|
| Protein sequence | MAPHALAAES LNGSETASFV ELDSASSAIL NASPFGSTVD PNLVKGTAYT SPSIIINQAI
YSIATKIFSY ETVGAENLLD SHIQLWAQNF HRENSFGVVP FFHKLQVRSG ASNAILGYFK
KNGTSGQPVA TLVGANALTY MRTSLAGKTA ESLPLAFNVS AIDYDSASDS LVSNYITPLS
VARSLGYATI TPVNSQSGLE LQHVTVLNHY LVSLMGVPSL NLFDGPEFSK TFSKFSHLLS
VEDVGRLYQQ LLTATTATPT SLDEAVDVAF DTLNRLTGST YSQFEYSGAR NATTVFVVYG
SHESTQVGAL IEAGVPGVGL IKVRVPLPFN QAKFVEAIPA STRKLVILSQ TDGSATSSLK
ADATAALFLT GRYSALSLDE FSYPLKFDWT PITISKIISE FVPDFNPESV LAPSALQSFV
GQITANTSPV GKYLIWGKDN GSFVGTGDKL ALSLSLDDSK TVSIRNKYDN SRAGGVIQSS
IATNFNNNII ATVDSADVVI IEDSSLLASY DVLATAAPGG TVLLGNFKTI KESVDIDIVE
KLPIEFRKTL ARNHNKLTII DFSIVDELDE LNSSTKGFSA DFLVQLAFWR AALPELDGFI
VNKLLQANGN SFELLAAVLD KFINIADEKA GLKEVAVLPE WAELEEETEA AEAGDEEAAE
EEIPEALPFF VSETSIFPNP RTPQEAAEET KLVGYKHLAS KLTFPEAYNT KEALRPDLPV
KNFVVKVQEN KRLTPQEYSR NIFHIEFDVT GTGLTYDIGE ALGIHGRNNA EAVESFLQFY
GVDGDQIVEI SNKDDTSLVE TRTARQALTD SVDFLGKPPK RFYESLAEYA ETEDDKKKLT
TLANAEGAEE LKKRQEVDFD SYVDILEEFA SARPPFADLV KIIAPLKRRE YSIASSQRIH
PNAVHLLIVV VDWVDPRGRI RYGHCSKYLS DLKIGDELVV SVKPSVMKLP PLSTQPIIMS
GLGTGLAPFK AFVEEKIWQK EQGMEIGEIF LFLGSRHKKE EYLYGELWEA YKSAGVLTHI
GAAFSRDQPQ KIYIQDKIRE SIEDLTDAVC LKEGSFYLCG PTWPVPDITA CLEDIVKNGA
KRAGQEIKDV AKVVEDMKED GRYILEVY
|
|---|
| |