| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82860 |
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| Symbol | DIP5.3 |
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| ID | 4837678 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 555682 |
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| End bp | 557674 |
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| Gene Length | 1993 bp |
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| Protein Length | 583 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388993 |
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| Product | dicarboxylic amino acid permease |
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| Protein accession | XP_001383383 |
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| Protein GI | 126133717 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.916689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGGACTGTC CCAGCCTTAG ATATTCCTTA GATTTTGTAA AGAGTCTCTA CTAGTTGAAC
ACAGCCTATC ATGACTTCGT CGGACTTGGA GAAAAACTCC AACAACCACA ATGTCCACAA
CAACGACTTG GTGTCAGTGG TTTCACGTCA CACCCAAGAG TACGATCTCT ACGTCGCTAA
GTCCACTCCC TCTAACATTG CCTTTGAGGA CGGTCACCAG CTTAGACAGG CCTTGGACGC
CAGACACACC TCTATGATTG CCATTGGTGG TGCCTTGGGT ACTGGTTTGC TTATTGGTAC
GGGTTCAGCC TTGAAGTCTG CCGGGCCAGG TGCCATTTTG GTGGCTTACT CTATCATTGG
TTTCGTGGTC TTGATGGTTA TGAGCGGTTT GGGTGAAGTG GCTACATTCG TCCCTCTTAA
CGGGTTTGCC AATTACTGTC AGAGATACGT TGACGATGCC TTGGGTTTTG CCTGTGGGTA
CGTCTACTTG TTTAAATATT TGATCTTGCC TGCTAACCAG TTGGTTGCCG GTTCGTTAAC
TGTTCAATAC TGGGTTTCCA AAGACACATT GAATCCCGGT GTGTGGATCA CGATTTTCCT
TGTTATCATT TTGGCCGTCA ACTTGCTTGG GGTCAGATTC TTTGGAGAAA TCGAGTTCTG
GTTGTCGTGT TTGAAGGTTT GTACGTGTCT TGGTCTTGTC TTGCTCTTGT GGATCATTGC
CTTGGGTGGT GGTCCAACTC ACGAAAGATT GGGATTCAGA TACTGGAAAA ACCCCGGTGC
TTTCTTGCAC TACGCTGACG CTTCCAAAGA CTTGTACATC GGCGGCTCCT TGGGCAGATT
TGTCTCTTTT GTCTCCGTCT TGGTCACTGC TGTCTTCGCC TACTTGGGTA CTGAATTGGG
TATGTATTTT AAAAAGCCTG CACACATTAA AAGTGTTGCA GCTTTATATT TTTTGATTTG
AGTTTTTTGC AATCGTTGTT GCATCGGCTT ATCGTACATC TTACTAACAT CTTCTAGTGG
GTATCACCTT CAGTGAAACT AGAAACCCTA GACGTTCCAT TCCTAAGGCC ATCAAATTGA
CCTTCTACCG TATTCTTATT TTCTACATCT TGTCGATTTT ATTCCTCGGT ATGTGTGTCT
CAGCCAAGGA CCCATTATTG TTGTCTGCCT CTGGTAACAC CGCCAGTGCT TCTCCATTCG
TCATCGCCAT TAAAAACGCC AGAATCAAGG GTTTGGATCA CGTCATTAAC GGGTGTATCT
TGTTATTTGT CCTTTCCGCC GCTAACTCTG ATATGTATGT TTGTTCCAGA ACTGTCTACT
CCTTGGCTGT AGCTGGATAC GCTCCTAAGT TCTTCACTAA GACCAACAAG TTGGGTGTTC
CATACTACGG TATCTTGTTG TCCTTCGCTT TCACTTTGTT GGCTTATATG ACTGTCTCCA
GTGGAGCTGC TGAAGTTTTC ACATACTTTG TCAATGTCGT TTCCTTGACA GGTTTGATTG
CCTGGTCCTG TATTTTGGTT ATCCACATCA GATTCATGGC TGCCTGCAAA GCTCAAGGAA
TCGACAGAAA GACCGATTTG GCCTACAGAT CGCCTCTTCA ACCTTACGGC TCCTACCTTG
CCTTGGCCAT CTGTGTGTTG GTCATCTTTA TCAAGAACTT CACTGTCTTC TTGGGCTCGC
CTTTCCTCTA TAAGAACTTC ATCACCGGTT ACATTGTGTT GCCGGTATTT GTTATCATGT
ACTTTGGCTA CAAAATCTAC TACAGAACCT CGATCATCTC GGCTTCTGAT ATCGACTTGG
TCACCTACAG GGATGTCATT GACGCCGAAG AGCAACAGTA CAAGACTGAA GCAGAAGAAA
AGGAAGCTAT CAGACAAGCT GAAGGCAACC CTCACGACAA AGATTGGTTC TACGAGAAGT
TCTTGGGCTG GATCTTCTAA GGCATTTACG ACTATATAAT ACATTATGTA ATATACACTA
ATTTATTTGT TCT
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| Protein sequence | MTSSDLEKNS NNHNVHNNDL VSVVSRHTQE YDLYVAKSTP SNIAFEDGHQ LRQALDARHT
SMIAIGGALG TGLLIGTGSA LKSAGPGAIL VAYSIIGFVV LMVMSGLGEV ATFVPLNGFA
NYCQRYVDDA LGFACGYVYL FKYLILPANQ LVAGSLTVQY WVSKDTLNPG VWITIFLVII
LAVNLLGVRF FGEIEFWLSC LKVCTCLGLV LLLWIIALGG GPTHERLGFR YWKNPGAFLH
YADASKDLYI GGSLGRFVSF VSVLVTAVFA YLGTELVGIT FSETRNPRRS IPKAIKLTFY
RILIFYILSI LFLGMCVSAK DPLLLSASGN TASASPFVIA IKNARIKGLD HVINGCILLF
VLSAANSDMY VCSRTVYSLA VAGYAPKFFT KTNKLGVPYY GILLSFAFTL LAYMTVSSGA
AEVFTYFVNV VSLTGLIAWS CILVIHIRFM AACKAQGIDR KTDLAYRSPL QPYGSYLALA
ICVLVIFIKN FTVFLGSPFL YKNFITGYIV LPVFVIMYFG YKIYYRTSII SASDIDLVTY
RDVIDAEEQQ YKTEAEEKEA IRQAEGNPHD KDWFYEKFLG WIF
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