| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82645 |
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| Symbol | |
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| ID | 4837902 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 540867 |
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| End bp | 545801 |
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| Gene Length | 4935 bp |
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| Protein Length | 1489 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389217 |
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| Product | predicted protein |
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| Protein accession | XP_001383738 |
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| Protein GI | 150864767 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.688651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.590002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGTTGCATCC GTCTTCCATA CCTTGTTTCA GAACGTCCTG GTCGTTTTAG AACGACTCAA
TTAGCTTGAT TTTTAATTTT ACTCTCCATC AAAGGGTATT TTTCAGTTAT CCATTTTTGA
TAAATTTTTC TTTACTTGAA TATCCAATTT TCACAAACAG ACATATACAT ACATTGACAG
TCCATCCCCG TTTATAACAT CTCTGAATTG AATTCCAGAA CTTCAAACAC CCACAGAAAT
GCAGCATGCG CGAATCTTCA ACTCCGGGGG CCAGTCAAGG CGAAACCATT CTGGGTCCAG
TAATGTCTTG AGCTCACAGT CGTTATCCAA GTCCAACTCC ATGAACTCAA TGTCTGCCAG
CCAGATGAGT ATTCAAATAG GAGCTTCCCG TGTAACGTCT TCTTCTTCTG GTAACCACTT
TATGAATAGA AATATGAGAA GTACTATAAC TGTAGGAAAG AAGCATGCAC CAATTGAACA
ACAAATTCAT CAGACTCAGA CCCCCAACTT GGTACGGTCA ATATCGAAAA ACAGCGAATC
CCTAGGAGCA ACTACTATAA GAGAAGATAC TCCGCAGACG TCTACAGTCC AACCTAATCT
TAAGGACCCT ATCCCTCTAA CAGTATGGTT TCATGATCTT AGAACTTCTG ATGAAGATGT
AATAATCGAC TCCAATGCCA TACCAGGAGG TGTGCGAAAC GGACAAGTGT ATATGTTACA
GCTGTTGGAA ACCGAAGATC TGAAAAAGTT GCTCTTCGTC ATCAACGATC GAAACATAAG
AGATAATAAT GCCGCTGCGC AAGATGATTT ACAATCGGTC GAATCCCCCC AACAAGAACC
AGCGAGTCAA GCTGTACCTA TAGCGAAGTC TAAGTTCCAG ATTTCGTTGA TATCTAATCC
GTTACAAAAA TTGTTGGATA TTCCACCTCG TAGTTTAGTG CAGATCAAAC GGATTCAGAA
CTTGGCTAAG GTTGAAGCTG ATTCCGTAGA AATCTTTATC AAAGACGTCA ACTTATCACG
AGACTCTATG TGGAACTTTT CTTCCACTTT GGTGAATTCG TGTGTACACA TCGACAAAAG
ACTATTGTTC CTAAACAACA GGACAGGCAT CGTAAAGTAT ATCTACAAGA ATGGACGGAA
CGTCTTCTCG GGCTACATTG GTGAGAATAC GAAAGTCACT TTCAGATCTG AAAGTGCAAA
GCTCACCGTT TTGGTACAGT TGTCACGGGA AATGTGGCAC TTTGAAGAAA ATGGCGAAAT
TATGTTCCAT AAGCTTGTAA ACAACTTGTT TCCCAAGATG TTTAAAAGAT GGAGAGATAG
AAATACCCAT CATGCAATCA CAATAGTCTT GTTCACCAGC ATGGATTTGA CTGATATACC
GTGGACAACT TTGGGTCAAG GTGAGAGACC CAATAACCGC AGAGACTACT TCAGAGTTGT
CGTAGACCAG GTTAACATCT TTCACTGGGA TAAGATTATG GCCAATTTGC GGTTGGAGTT
TGCTAACTTC AAACGTGATA TCATGTTGAA TCAGCAAGAT ACAAACCACT ACACTATGGA
TGGTGAACCT CTCCCTTCTG TGAAAGGAAA CATATTGGAA GCAGTCAACT TGGGAATGAC
CTTGGCAAAC AACAGATTCA TTAACACTGA TCTTAAGCAT TCCTTGAACC ATTATATCGT
TGTAACTCCA GGAACAGGTA TATATGATGT TGACTATGAG CTCATGCTTG AAACAAGCAA
GAAGATGTCC ACAATTGATT ATGGATTGGA CATCATTTGT TTGAGTCAAC CTCCTCTTCA
TGTTGTCCCA TTATTTCGTT TTTCCAAAGA TGGCAAAGTA AAGCACGTCG TTCCTAACTG
GTGTGATATT TCTTATTACA AAGATCTGAA CCAGTCTGCA AATCTGTGGA TCCCTCGTTG
CAAGATTTAT GAATTGCAAA TGATGGGAGT CATGGAAAAC AATATGAATC AGATCAGAAT
AGATCGCTTT CAAGTTACCC AAAAGGCTCC TACTATGATA GAAGCCATGG ATAACTACGA
TAACGACCTT TTCAAACCGG TGAATCATAG AAAATATATA AAGGAAAACG ATGAAAAGGC
AATAGACAGT TATGAAATAA AGGAAAAGAA CAATTCCAAA TTCAAACCCA CAACCTTAAA
AAATGCCAAT GCGACCCTTT CGTTGATTTT CAACAACAGA ACTCGATTGC AGCCTACCGA
ATTGACTCCC TCGAATTCAT CGGTGTTGGG AACTGTTACA CATAGCAATG GAGAGGCTTT
GTCGACGTTG TACAATTTGA ATAAGATTTC TGATGATCGC ACTATTTCTT CCTTAGCCCC
GCTGATTTCT AGCACCAGAT CAATAAGTAG CAAAAGATCC ATGGATATCT TGAGAAAAGA
AACACATTCG CCTCGTTTGA TTAAGAGTGA TTCCTTATTC AAAACTGAGA CAGGAGCTTC
TACACCTGCA GAACCTAGGA CAACGAAATC TGTTGAACGG GAACGTAAGT CTCGTCACCT
TATGAAACGT CCAGATAGAG ATTTTTCGAA ACGCAGATCT CAGAGTAAAG GTTCAGGGAA
CGTAGATTAC GAATCTGAGA ATCCTACTGA TATCTTCTGG ACTGAGATTG AAAACCCTTC
TCAGGAATAC CGTGCAGATA CACTTTTGTA TCCCAATGTG AGTAGGTGGA GTAATGCTTT
CCCAGATAAA ATCAGACGTA GATTGGTGAA GTGGAGGTCA TTGCAGTCTC CAGCCGCATT
GCCTATTACA ACCTCTGTAT TTCCGTCTGT AAAGATATTA GAGACTGAGT ACACGTTTCA
AATTTACAAT GTGTTGCTAA ACTATGAAAA CTACTTGGAA CTTGAAACAA CTCACGAATT
GATGCGTGAA ATGATTCAGT TGAGACTTCT TTTAGGTTTC CAAATTTGTT TTGGTGATCA
AGTTAAAAAA GCTGAAAGTG AACGCAAGCC AGCTGGCAAT GTGGAAAGCT TGATAAAGTA
TTTGCCAAGG CACAGCTCAC TCGGAGCACG AATTTATATG TCTCTTGGAG ATGAGATACA
TCGTATCTAT CTTGACTACA ACGGGAATTT AAATGTCCAA TTGTATCATA AGACGGTGAC
TAATGAAGAA AACAAGATCA CTCTTGGCCA AGCCAAACTT ACCAACTACT TTCCATTAAT
TAGAACTCGT TATGCTGATG AATACTCCAC AGCGAAAATT GATGGTATCA ATCTGAAACC
AAAGATGTAC AATTGGAACC AGTTCGACCA ATATTTAGCT GGGTATGAAG ATGCTATGCC
AGATGCAAAT AAGGATTTCT ATAAAATGAA GTTCGTTGTA ATGCCAGCAC CTATTCCTAA
GAACGCTTTC TATATTACCA ATGAGAACTT GACAGACGAA GAAATTCGTG TTGAAGGCTT
AAGAAAGTTG ATCGCTATGA TTGAAAAAGG AAAGTATTTG AAGAGGAAGG TTACTTCTAA
GAAAGAAGAA ATATTGCCTG AAATTGTATT CTACACTGGC AACTTGTACG ACTTCTTGAA
TGAGGAGGCA CAGAACTTTG ACAATACTGG AAATCAGGCT GGACTTATGA TTCCAGAGAG
CATGAGATTC AATAAGAGTA TTAAACTTTC TGAATTAGCA GAGGAATTGC AGACCCGGTC
TACTGGTCTA CCATTAGTTG ATAGAACGTG GCATTTCAAG AGACATTTGC ATTGTTTCTT
AGGAAGTGAG TTGGTCTCGT GGTTATTGGA ATGTTTTGAA GATATTCAGA CCAGGGACGA
AGCCACAAGC TATGGTCAGT CGTTGATGAA CAAGGGCTTG TTCAAGCATG TTGAACTGAG
ACATGGATTT TTGGATGGTT ACTACTTCTA TGAATTTGAA AGTGAGTACA TCGACAAGAC
CTATATCGAG CTGAAGAAAG GCTGGTTTGG AATCAAGAAG ACTTCTTCAG AAAAGCCAGA
CACCGATTCC AATACTCCAG TGTATACGAG AAACAATTCC GATGTCGAAT CACTCTCTTC
ACCAGCTTTG CCCCTGCAAG ATCCGCTTGA TTTGAAAAGA ATAACTAGTA CCTTAATTAC
AGACTCTGGA GCATCTTCAT TAGAAGGAAG TAGAAGAAGA AAGAAGTTCA TCTTAAGCAG
AGCCGTTAAG TACAATGTTG ACAGTTTAGG TAAATCATTC AGACCCGAAA TTGTTACCGT
TCATTATGAC AGAGTTCATA ATCCAGAGCA TTGTTATCAT ATCAGATTGC AATGGCTAAG
TACCACGGGA AGGTTTATTG ACGAAGCCAT TACCAACTGG TCCAGATTGT GCGAGAGACA
TGGGTTGAAA TTAGTGGAAA CTCCTTGGAA AGAGCTATGT AATATTCCTC TGATCAGTCC
GTTCCACTCC TTTGTCGATA TCAAACTTTG CGTGAACCCT CTTGTTGATC CTGAATTCCT
GGATGTGAAG ATTCTCAGAA AGAATAGGTT TTACTATCAC TTGTATTTCC TCAAGAAATT
TGAATTCCTC TTGGATAACA GATCATCTCT TTTCTTTCTG AAAGATAGTA TTGAAATCTC
ATACAGTTGG GGTAAACCTT CGTTTCAATA TGCCCAATAT ATTCATAAAA ATGGCACTTA
TATTATTGAG CTTCGTGACA ATGGAGACTT TTTCCTTGCT CCCAATAATA TCCATATCAC
CAGAGTGAAT ACTACACTCA CATCAATTCC CGACTTTGAC GGTAGCATCA CGACGTACAA
TACAAATTCC CAACAGGTTA TGTTGAACTT CAGGTCTGCT TGTCAGAATG AAGATTATTT
GAAAGAATTG TTCCGCGAAG CGAAAAGCAA CTGGCGAGAA GAGTTTCCCT TGGATATGAT
GCCTACGGAT CTTCCTCAGT AATAGAAGTT GAAAAGTTGA AAAGTTGAAA GTTTGTCTTG
TAAATATATA TGTAT
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| Protein sequence | MQHARIFNSG GQSRRNHSGS SNVLSSQSLS KSNSMNSMSA SQMSIQIGAS RVTSSSSGNH
FMNRNMRSTI TVGKKHAPIE QQIHQTQTPN LTSTVQPNLK DPIPLTVWFH DLRTSDEDVI
IDSNAIPGGV RNGQVYMLQS LETEDSKKLL FVINDRNIRD NNAAAQDDLQ SSKFQISLIS
NPLQKLLDIP PRSLVQIKRI QNLAKVEADS VEIFIKDVNL SRDSMWNFSS TLVNSCVHID
KRLLFLNNRT GIVKYIYKNG RNVFSGYIGE NTKVTFRSES AKLTVLVQLS REMWHFEENG
EIMFHKLVNN LFPKMFKRWR DRNTHHAITI VLFTSMDLTD IPWTTLGQGE RPNNRRDYFR
VVVDQVNIFH WDKIMANLRL EFANFKRDIM LNQQDTNHYT MDGEPLPSVK GNILEAVNLG
MTLANNRFIN TDLKHSLNHY IVVTPGTGIY DVDYELMLET SKKMSTIDYG LDIICLSQPP
LHVVPLFRFS KDGKVKHVVP NWCDISYYKD SNQSANSWIP RCKIYELQMM GVMENNMNQI
RIDRFQVTQK APTMIEAMDN YDNDLFKPVN HRKYIKENDE KAIDSYEIKE KNNSKFKPTT
LKNANATLSL IFNNRTRLQP TELTPSNSSV LGTVTHSNGE ALSTLYNLNK ISDDRTISSL
APSISSTRSI SSKRSMDILR KETHSPRLIK SDSLFKTETG ASTPAEPRTT KSVERERKSR
HLMKHYESEN PTDIFWTEIE NPSQEYRADT LLYPNVSRWS NAFPDKIRRR LVKWRSLQSP
AALPITTSVF PSVKILETEY TFQIYNVLLN YENYLELETT HELMREMIQL RLLLGFQICF
GDQVKKAESE RKPAGNVESL IKYLPRHSSL GARIYMSLGD EIHRIYLDYN GNLNVQLYHK
TVTNEENKIT LGQAKLTNYF PLIRTRYADE YSTAKIDGIN SKPKMYNWNQ FDQYLAGYED
AMPDANKDFY KMKFVVMPAP IPKNAFYITN ENLTDEEIRV EGLRKLIAMI EKGKYLKRKV
TSKKEEILPE IVFYTGNLYD FLNEEAQNFD NTGNQAGLMI PESMRFNKSI KLSELAEELQ
TRSTGLPLVD RTWHFKRHLH CFLGSELVSW LLECFEDIQT RDEATSYGQS LMNKGLFKHV
ESRHGFLDGY YFYEFESEYI DKTYIESKKG WFGIKKTSSE KPDTDSNTPV YTRNNSDVES
LSSPALPSQD PLDLKRITST LITDSGASSL EGSRRRKKFI LSRAVKYNVD SLGKSFRPEI
VTVHYDRVHN PEHCYHIRLQ WLSTTGRFID EAITNWSRLC ERHGLKLVET PWKELCNIPS
ISPFHSFVDI KLCVNPLVDP EFSDVKILRK NRFYYHLYFL KKFEFLLDNR SSLFFSKDSI
EISYSWGKPS FQYAQYIHKN GTYIIELRDN GDFFLAPNNI HITRVNTTLT SIPDFDGSIT
TYNTNSQQVM LNFRSACQNE DYLKELFREA KSNWREEFPL DMMPTDLPQ
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