| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82035 |
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| Symbol | PXA2 |
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| ID | 4837091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1760384 |
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| End bp | 1762841 |
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| Gene Length | 2458 bp |
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| Protein Length | 689 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388406 |
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| Product | Peroxisomal long-chain fatty acid import protein 1 (Peroxisomal ABC transporter 2) |
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| Protein accession | XP_001382564 |
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| Protein GI | 150863918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.670256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTTCCTAAAG CAACGTCCGA TTTTTCCTTT AGTTGAAGTG TTCTTTTTAC TCTCTCACTT
CTTCTTCAAG TCTGGACCGA GGAATAGAGA ACAAACAGAT CTCAAATCAT AGATTGTCAA
CCGGGTAAGA GTACTCCTCA ACAAATAGCA CAACATACAC TACAGCGTTT GTACTGTTGA
TGGAGACGAT ATATATATCC CCAATACCTG TTATTTATAG AGCTGTTTCT GTTTGTGATC
TTTTTCACTT TCAATATATC GCTGCCATTT TGTTGACCGT TCACAGTTCA TAGTTCAATC
TCCATATCAC AACTGTCTAG TCTAGTATTC ACCATGACAA ACTCAGTCTC CACGTTCAAC
CCGGCGCATC CCAACAACTC GCTTGCGTTG TCGCTCTTCA ACGTGTACAA GTCTAATCGG
TCGTTGTTTC TCAATTCTTC ATATATCATT CTCATCACTT TGGCCTTTTC TAGGGCTACC
AACACGGGCG AGAAAAGAGA CCTAGACATC TCCAAAGATA AGAAGAGAAT TGACGAAAGG
GCCTCGTCAC ATCCTAAGTT GTCTAAGGAG TCGTTCTACC GCCTTGCTCG TGCCATCTTT
CCCTCAGCGA CAGACCCTAC CATCTTGTAC TTTTTGGGCC ACTCGATTCT TCTAGTCTTC
AGAGCTCTTC TCACTATAAA GGTCGCTAGT TTAGATGGTC AGTTGGTAGG AGCGTTAGTG
ACGAAGAGAT TGAGAAAGTT TGCCAAATTG CTTATGATTT GGATGGGATT AGGTCTTCCA
GCTTCTATCG TCAACGCTCT TTTGACCTGG ACAAAACAGA ATTTGAGTAA GGCAATCAGG
GTCAACCTCA ACAACAGCAT AATGGACGAC TACTTGCCAG ACAACTTAGA CGCAAACTAC
TACTCGTTGA TCCAGTTGTC AGGTAATAAG ATCAAGGATC CGAACCAAAG AATCACTACC
GATATCACCA GATTGAGTTA TGCCTTGAGT AGCTTACCGG GGCAATTGTT GAAACCAACT
TTGGACTTAC TCTTGTGTGC ACAGCAGTTA AGTAAAAGCG GTGTAGGTAA CGGCGAGGGT
ACATTGGCTC TTGGAATGCT TGCCCATTTC TCTACAATGA TCTTGAGATT CTTCTCCCCG
CCTTTCGCCA AATTGGCATC AGAAAGAGCC AATCTTGAAG GTCAGCTACG TTCTTCTCAT
TCCAAGATTG TGAGCAACAG CGAGGAAATC GCTTTCTTGA GAGGGCATCA ACGAGAGTTG
GATTACATCG ACTATTGCTA CTACACCTTG GAGAGATTCC TGAAGAACGA GATTTGGAAA
AAGGCAATTC ATGAAATTGC GCAAACTTTC ATTGTCAAGT ACTTCTGGGG TGCAGCTGGT
TTGGTGTTGT GTTCAGCTCC AATTTTTATC AACAAGTATC TTGGCGAAGA CCCAGATGCC
GACCATGCTG GTGACTTCAT CACTAATAGA AGATTGTTGA TGAGTGCCTC TGACTCGTTG
GATAGATTGA TTTACTCAAG AAGATACTTG CTTCAAATCC TTGGTCATGC CACCAGAGTT
TCCGACTTAC AAGACACTTT GTTCGAGTTG AAGAACAAGA AGAAATCGAC AAAAAATATC
GAAATGAACA ACGAAGAAAT TACCTTCAAA GACGTCAGAT TGTTGACTCC AGCAGATGTT
ACCTTGATCG AGTGCTTGAA CTTTTCAATA AAGAGAGGTG ACCATCTTTT GATTGCTGGT
CCAAACGGTT CTGGTAAATC TTCTCTATTC AGAATGTTAG GTGGTTTATG GCCATGCAAG
GAAGGAAGTA TAACCATTCC TAACACAGAG AATATGTTCT ACTTGCCACA GAGAGCTTAC
TTGTGTCAAG GTTCATTAAG AGAACAAATA ATATATCCTC ACAACTTGAA ACAGTTTAGA
GCCAGCCAAA AAACCGACCA GGATTTGAAG GATATCTTGA CTCTCTTAAA GTTAGATGAT
CATTCAGACC GTTTGGATGA TACCACCAAT TGGAGTGAAG AGTTGTCTAC CGGAGCCCAG
CAAAGACTTG CCATGGCCAG ATTGTACTAC CACAAGCCTA GATTCGCAGT TTTGGACGAA
TGTACTTCAG CCGTATCTCC TGATATGGAG CAATTCATGT ACAAACATGC CCAAGAACTC
GATATCACGG TGTTGTCTGT TGCTCATAGA CCCGCTTTGT GGCATTTCCA CAAATATTTA
TTGAAGTTCG ATGGAAAAGG TGGGTACTAC TTTGGAAAGC TAGATGCTGA AAAGAGATTG
CAGTTCGAAC ATGAAAGAAT TTTGCTCGAC AAATCTTTAA GAGATGTACC AAACTTGAGA
GAAAGATTAT TTGAATTGAA AAAGGTGTCT ACGGCTCAAC ATAAGAAGAT TGACCATATA
TAGCCTTACA AAGTGAATAT GCTAGTGCGA GTTACCTAAT ATAATGGAGA TAGCTAAA
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| Protein sequence | MTNSVSTFNP AHPNNSLALS LFNVYKSNRS LFLNSSYIIL ITLAFSRATN TGEKRDLDIS
KDKKRIDERA SSHPKLSKES FYRLARAIFP SATDPTILYF LGHSILLVFR ALLTIKVASL
DGQLVGALVT KRLRKFAKLL MIWMGLGLPA SIVNALLTWT KQNLSKAIRV NLNNSIMDDY
LPDNLDANYY SLIQLSGNKI KDPNQRITTD ITRLSYALSS LPGQLLKPTL DLLLCAQQLS
KSGVGNGEGT LALGMLAHFS TMILRFFSPP FAKLASERAN LEGQLRSSHS KIVSNSEEIA
FLRGHQRELD YIDYCYYTLE RFSKNEIWKK AIHEIAQTFI VKYFWGAAGL VLCSAPIFIN
KYLGEDPDAD HAGDFITNRR LLMSASDSLD RLIYSRRYLL QILGHATRVS DLQDTLFELK
NKKKSTKNIE MNNEEITFKD VRLLTPADVT LIECLNFSIK RGDHLLIAGP NGSGKSSLFR
MLGGLWPCKE GSITIPNTEN MFYLPQRAYL CQGSLREQII YPHNLKQFRA SQKTDQDLKD
ILTLLKLDDH SDRLDDTTNW SEELSTGAQQ RLAMARLYYH KPRFAVLDEC TSAVSPDMEQ
FMYKHAQELD ITVLSVAHRP ALWHFHKYLL KFDGKGGYYF GKLDAEKRLQ FEHERILLDK
SLRDVPNLRE RLFELKKVST AQHKKIDHI
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