| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81289 |
|---|
| Symbol | CYR1 |
|---|
| ID | 4851836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2961602 |
|---|
| End bp | 2964029 |
|---|
| Gene Length | 2428 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640393544 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | XP_001387132 |
|---|
| Protein GI | 126275747 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000312189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTATGAATCT GCTTCGTAAG CTGTTCACAC GATTCATTTC CATGTCCACA GTAAAGAAAG
TGACACAGCC GGAATGGCAC GCGCCCCAGC CTTCTGCTGT TGGAAAGCCA GTATTGAAAA
TCTACAACTC TCTAACCAGA TCCAAGACTG AATTTGTACC CATTGTACCA GGACACATCA
CCTGGTACTG TTGTGGACCA ACCGTATACG ACCATTCGCA TATGGGCCAT GCCAGAAACT
ACGTTTCTAC CGATATCTGT AGAAGAATTT TTCAGGATTA CTTTGGCTAC AACGTCAAGT
TCATTCAGAA TGTCACTGAC ATCGACGATA AAATCATCAT TGCTGCTCGT CAACAGTACC
TTTTTGAACA AAAGTTATCT GGCGTGTATC AGCAAGTCAA TTCTGAGTTG GTTGCAAAGT
CCGAAGAGTA CTTGACTTCT TATGTAGAGA AGAATTTACC TGAATTCACA GGTAAGGATA
TTAAAAGTGA GTTCATTGCT TGGGCTGACT CTATTGCAAG CAATGTTCAG GACATTGCTA
AGGAAAAGCC CAAGTTCCCC ATGTACTTGA AAGCAGCTAG AAGGGCCCAC GATGCCATTT
ACTCTACTAA TGTTTTAGCT ACGCCTATTG CAGAGTACCT TGAGAGTATC AAAGAGGTAG
CCACACCTCT GTTGGATAAG GAGTTCGGCT CTACTGTAAA CGATCCTTCT ATCTTCAGAA
AGTTGCCTTC TTTCTGGGAG AACAAGTTTG ACCAGGACAT GGCCAGATTG AATGTCTTAC
CCTCTACCGT CACTACTAGA GTGTCTGAAT ATATTCCTGA CATCATTGAG TTCATAGACA
AGATCATAGA GAACGGCTTT GGCTACCCAA CAAAGGACGG CTCCGTCTAT TTTGACACTG
CCAAGTTTGA AAACGACCCC AACCATGACT ACGCCAAGCT TCAGCCCTGG AACAAGGGAG
ACATGTCGTT GATTAACGAT GGAGAAGGAT CCTTGACCAC TGGTCAGGAT ACAAAGAAGA
GTTCTGCTGA CTTTGCATTG TGGAAGGCTT CAAAGCCTGG TGAACCATCT TGGCCATCCA
AGTGGGGTGA AGGTAGACCC GGGTGGCACA TCGAGTGTTC TGTGATGGCT TCAGACATCA
CGGGACAAAC TATGGATATT CACTCTGGAG GTATCGATTT GTGTTTTCCA CATCATGATA
ACGAATTAGC CCAATCTGAA GCTTATTTCG ATAACAAGCA ATGGGTTAAC TACTTCATGC
ATAGCGGCCA TTTGCATATC CAGGGCCAGA AGATGTCCAA GTCGCTCAAG AACTTTATCA
CTATTGAACA AGCATTGGAG GATTTTAGTA GTAGGCAGTT GAGATTGGTG TTTGCCTTGA
GTTCGTGGGA AAAGCCGCTT GATTTCAAGG ATTCTTTGAT CAGTGAAGTC AAGACCATTG
AATCTGCCTT CTCCAAGTTC TTCACAAATG TGCGTGCCTT GAATAACGAC TACAAGCACA
AGGTCAACGA CGGTGAGTTT GTGTCCAAGA AGTTGAGCAA ATATGAAAAG CAATTGTATG
ACGATTTGGA TATTGCTCAG GATGAAGTGG ACGTTGCTTT CAACGATAAC TTGGCCAGCG
GGCAAGCTTT GAGGGCCATT CAGATTTTGA TCTCCAAGTC GAACAACTAC ATCCAATTGG
CTGCCAGTGG AGAAACTGAG TTAAGAATAG ATGTGTTGTT GCAGGTAACT CGCTGGATCG
TTAAGATCTT GGAAATTTTA GGTTTCGAAG CTAGAGCTGA CCGTTTGGGT TGGGTTGATT
CCAGTGAAGC TGGAGAAGGT GCTGGATCTA CAGAAGATAT TGCACTTCCA TACGTAAAGG
CATTGTCCCA GTTCCGTGAT GCAGTCCGTA ACTTGGCAAT CAGTAAAGCT GACAACAGCG
AGATCCTAAA GGCATGTGAC ACCATCAGAT CCGACTTGAT AAACTTGAGT GTTTCATTAG
ACGACAGACC AAGCGGTGCT GCCTTGGTTA AATTCTTGAA TGCTCTGGAG AAGGAACAAT
TGATCCAACA GCAGGAAGAT AAGTTGAAGG CCATTGCTGA GAAAGAAAAG AAGAAGCAAG
AACAGGCAGC TGCTGCCGCT AAGAAAGAGG AAGAAAGACT TGCCAAGATG AAGATCAACC
CTCAAGACAT GTTTAAGGAC TCCTCGTTGT ACTCTACATG GGACGAAAGA GGAATTCCTA
CCAAAGATGC AAAGGGCGAA GACGTTTCCA AGAGTATGCA AAAGAAGTTG ACAAAGCAAC
ACCAACAACA GCAAAAATTG TACGACGAGT ACTTGGCTAG TCAGAAGGCT TAGTCCATTT
GTAAATAGTA TAGGATATAA TGTACGGTAA TTGCACTGAT TATAGTGATT GCAACCAAAT
GTGGTGCATA TAAATGTCTC TAAGCCAT
|
|---|
| Protein sequence | MNLLRKLFTR FISMSTVKKV TQPEWHAPQP SAVGKPVLKI YNSLTRSKTE FVPIVPGHIT
WYCCGPTVYD HSHMGHARNY VSTDICRRIF QDYFGYNVKF IQNVTDIDDK IIIAARQQYL
FEQKLSGVYQ QVNSELVAKS EEYLTSYVEK NLPEFTGKDI KSEFIAWADS IASNVQDIAK
EKPKFPMYLK AARRAHDAIY STNVLATPIA EYLESIKEVA TPLLDKEFGS TVNDPSIFRK
LPSFWENKFD QDMARLNVLP STVTTRVSEY IPDIIEFIDK IIENGFGYPT KDGSVYFDTA
KFENDPNHDY AKLQPWNKGD MSLINDGEGS LTTGQDTKKS SADFALWKAS KPGEPSWPSK
WGEGRPGWHI ECSVMASDIT GQTMDIHSGG IDLCFPHHDN ELAQSEAYFD NKQWVNYFMH
SGHLHIQGQK MSKSLKNFIT IEQALEDFSS RQLRLVFALS SWEKPLDFKD SLISEVKTIE
SAFSKFFTNV RALNNDYKHK VNDGEFVSKK LSKYEKQLYD DLDIAQDEVD VAFNDNLASG
QALRAIQILI SKSNNYIQLA ASGETELRID VLLQVTRWIV KILEILGFEA RADRLGWVDS
SEAGEGAGST EDIALPYVKA LSQFRDAVRN LAISKADNSE ILKACDTIRS DLINLSVSLD
DRPSGAALVK FLNALEKEQL IQQQEDKLKA IAEKEKKKQE QAAAAAKKEE ERLAKMKINP
QDMFKDSSLY STWDERGIPT KDAKGEDVSK SMQKKLTKQH QQQQKLYDEY LASQKA
|
|---|
| |