Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_80185 |
Symbol | CAD2 |
ID | 4851458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1859869 |
End bp | 1861161 |
Gene Length | 1293 bp |
Protein Length | 331 aa |
Translation table | |
GC content | 43% |
IMG OID | 640393166 |
Product | CAD family protein |
Protein accession | XP_001387596 |
Protein GI | 126274586 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.101414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTTTGGTAT CAATTGATAT TCTCTTGTCT GGCTTTTTCG AATTCTAATT GACACCATTC TAACTTCGAT TTCGCAATTA TAATCCGGAG TCGTTTCCCT AATTGGAATT TTTCAAGTAC TTATAATCGC TGATTTCCAG TTTTTCAGAA TCCCCATTCG GAGTATTTCG CTTTTCATTG AACTATTCTG CTTTCTGGAT ATTCAATTAA CCTCAATTGC TACTCAATAC ATATTACGTC ATGTCTGAAG TCTACTTAGT CACCGGAGGT ACTGGTTACG TTGCCGGATT TGTACTTCTC CAGTTGTTGG AACAGGGTGC AAAGGTCAAA ACCTCGATCA GAAGTTTGGC CAAAGAAGCC CAATTGAGAG AGTCTCTCTA CTCCTCAAGT GACAAGCTCA CGAAGGAAAT CGTGGATGCC AACTTGAAGG TCTATCAAGC TGATTTAACC TCTGACGCTA ATTGGCCAGA GATCTTTGAA GACGTCACCT ACGTACTCCA TGTAGCATCT CCATTTCCCT CTTCTCCACC AAAAGATCCT AACGATTTGA TTATTCCTGC TAGAGAAGGT ACCTTGAGAA TCCTCGGCTA TGCTGCTGAA ACCAACACTG TAAAGCACGT AGTCGTGACT TCGTCTTTCG CAGCCATTGG CTTTGGTCAT GCTGAAGTCA AGCCACTCTA CACTGAAAAG GACTGGACTG AAACGGAAAA CTTGGACCGT CCTTACACCG TCTCCAAGAC ATTGGCTGAA AAGGCTGCTT GGGAATACGT TGAAGCTAAA CCAGTCCAAT ATGGCTTGAC TGTGATCAAC CCAGTCTTGG TTATCGGACC TTCTTTGAAG AAGCAAGTTA CCAACTCTAC CTCCTTGAAC ATCATCCAGG GCTTGATCGA TGGCTCGAAG AAAAATGGTG TAGATCCATC TTCTGTCCAC CTTGTTGACG TTAGAGATGT TGCTAAGTTG CACATCTTGG CTTTGACCAC AGAAGAAGCT CTTGGTGAGA GATTCTTGGC TGCTACTGGT AGCACCCTTA CGTGGGTAGA TGCAGCTAAC ATCTTGAGAT CTAGAATCCC AGAGAAGTAT GTAGCTAACT TGCCTACAAA GGAAACTGGC CCTAGTGAAA CTCCTAAGTT GATTTCTGTT GAAAAGGCCA AGAAGACCTT CAACTGGACC CCAATCTCTG ACGAAGAGTC CTTGGTTGCC ACTGTCGAAG GCATTATCCA AGAAGGAAAG GTCTAGTAGG ACGTTTATAA CAATTTAAAT ATGCATATAA TGAACAATGT ATGTCATATA TTT
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Protein sequence | MSEVYLVTGG TGYVAGFVLL QLLEQGAKVK TSIRSLAKEA QLRESLYSSS DKLTKEIVDA NLKVYQADLT SDANWPEIFE DVTYVLHVAS PFPSSPPKDP NDLIIPAREG TLRILGYAAE TNTVKHVVVT SSFAAIGFGH AEVKPLYTEK DWTETENLDR PYTVSKTLAE KAAWEYVEAK PVQYGLTVIN PVLVIGPSLK KQVTNSTSLN IIQGLIDGSK KNGVDPSSVH LVDVRDVAKL HILALTTEEA LGERFLAATG STLTWVDAAN ILRSRIPEKY VANLPTKETG PSETPKLISV EKAKKTFNWT PISDEESLVA TVEGIIQEGK V
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