Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_79556 |
Symbol | |
ID | 4840707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 567470 |
End bp | 568474 |
Gene Length | 1005 bp |
Protein Length | 262 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392022 |
Product | predicted protein |
Protein accession | XP_001386303 |
Protein GI | 126139561 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1471] Ribosomal protein S4E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.116079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGACAAAATG GGTAGAGGAC CAAAGAAGCA CTTGAAGAGA TTAGCCGCTC CATCCCACTG GATGTTGGAC AAATTGTCCG GAACTTACGC TCCAAGACCA TCGGCTGGTC CACACAAGTT GAGAGAATCC TTGCCTTTGG TTGTCTTCTT GAGAAACAGA CTTAAGTACG CTTTGAACGG TAGAGAAGTC AAGGCTATCT TGATGCAACA ACATGTCAAG GTTGACGGTA AGGTCAGAAC TGACTCTACT TTCCCAGCTG GTTTCATGGA TGTTATCTCC TTGGAAGCTA CCAACGAACA CTTCAGATTG ATCTATGATG TCAAGGGTAG ATTCGCTGTC CACAGAATCA CCGCTGAAGA AGCTTCCTAC AAGTTGGGTA AGGTCAAGAA GGTCCAATTA GGTAAGAGAG GTGTTCCATA CGTTGTCACC CACGACGGTA GAACTCTCAG ATACCCAGAC CCATTGATCA GAGCCAACGA CACCGTCAAG ATCGACTTGG CTACCGGTAA GATCACTGAC TTCATCAAGT TCGACACTGG TAGATTGGTT ATGGTTACCG GTGGTCGTAA CTTGGGTAGA GTTGGTGTCA TTGTGCACAG AGAAAAGCAC GAAGGTGGTT TCGACTTGGT CCACATCAAG GACTCTCTTG ACAACACTTT CGTCACCAGA TTGGCCAACG TCTTCGTCAT CGGTACCGAA GCCGGTAAGC CATGGGTTTC CTTGCCAAAG GGTAAGGGTA TCAAGTTGTC AATTTCTGAA GAAAGAGACA GAAGAAGAGC CCAACAAGGA TTGTAAGTGC TAGCTTTGGC TGGAGCACTG TGATCTTTGA TCTCTATAGT TGCATTTAAT GTAATATAAG TATAATAGCA ATTCTGTTGA AGTAGTGAAG GAGTATCATG GTAGAGTTGT ATAAAAAATG TATATAGATG AACAGCACGT AAGTTCATTG TATTTAGTTC ATTGGATTTT TCATACTCTT ATCATCTAAC TACAGTGCAT TGCAT
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Protein sequence | MGRGPKKHLK RLAAPSHWML DKLSGTYAPR PSAGPHKLRE SLPLVVFLRN RLKYALNGRE VKAILMQQHV KVDGKVRTDS TFPAGFMDVI SLEATNEHFR LIYDVKGRFA VHRITAEEAS YKLGKVKKVQ LGKRGVPYVV THDGRTLRYP DPLIRANDTV KIDLATGKIT DFIKFDTGRL VMVTGGRNLG RVGVIVHREK HEGGFDLVHI KDSLDNTFVT RLANVFVIGT EAGKPWVSLP KGKGIKLSIS EERDRRRAQQ GL
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