| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_79258 |
|---|
| Symbol | MYO5 |
|---|
| ID | 4840534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 47979 |
|---|
| End bp | 51903 |
|---|
| Gene Length | 3925 bp |
|---|
| Protein Length | 1256 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640391849 |
|---|
| Product | Myosin-5 isoform |
|---|
| Protein accession | XP_001386221 |
|---|
| Protein GI | 150866576 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5022] Myosin heavy chain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTTCACCATG GCCATTGTCA AACGAGGAGG ACGTACGAAG AATAAGACGC AGCAGCAGGC
GCCAGCCAAG TCTGGCATCA AAAAGGCGGA GTTTGATCTC CACAAACTGA AAGAGGTCGG
AGTTTCCGAC TTGACGTTGC TCTCCAAAAT CACTGATGAG GCTATCAATG ACAACTTGCA
TAAACGGTTC ATGAACGGCA CCATCTACAC GTACATCGGC CATGTTTTGA TCTCCGTGAA
CCCATTTCAA GATTTAGGGA TCTACGGCCC AGAGACCTTG CTGAAGTACC GGGGCAGAAA
CAGATTGGAG GTGCCTCCTC ACGTGTTTGC CATAGCTGAG TCGATGTACT ACAACTTGAA
GTCGTACAAC GAGAACCAGT GTGTGATTAT TTCCGGTGAA TCTGGAGCGG GTAAGACAGA
GGCAGCCAAA CAGATCATGC AGTACATCGC TAACGTCTCT GTCGATAGTG GCAATGCCGA
AATTTCAAAG ATCAAAGATA TGGTTCTAGC CACCAACCCC TTGTTGGAGT CGTTTGGCTG
TGCAAAGACG TTGAGAAACA ACAACTCATC AAGACATGGC AAGTACCTCG AGATCCAATT
CTCTGAGTCA AACCACCAGC CGATCGCCGC CCATATTACA AATTACTTGT TGGAGAAGCA
GAGAGTCGTT TCCCAGATTA CCAATGAACG TAATTTCCAC ATTTTCTATC AGTTCACCAA
ACACTGTCCG ACGCAGTATC AACAGCAGTT CGGCATTCAA GGACCGGAGA CTTACGTGTA
TACTTCTAGC GCCAAATGTA TCAATGTAGA CGGAATCGAC GATTCCAAGG ACTTGGACGA
AACATTGAGC GCAATGAAGA TCATCGGCTT AACGGAACTT GAGCAGAACA ACATTTTCAG
AATGATCGCT CTGATATTGT GGATTGGTAA CGTGTCGTTT GTCGAGGATG AAAGTGGAAA
TGCCGCCATT AGAGATGATA GTGTCACCCA ATTTGTTGCT TACTTGTTGG AAGTAAACCC
AGAGATATTA AAGAAGGCCA TAGTAGAAAG GGTTATAGAG ACAACCCATG GCATGAGAAG
GGGCTCTACC TACCATGTAC CCTTGAATAT CGTACAAGCT ACGTCGGTTC GTGATGCTCT
TGCCAAGGGT ATTTATAACA ATTTATTCGA GTGGATCGTA GAGAGAGTCA ATGTCTCGTT
GAAGGGGGCA CTGCAATCGT CCAAGACTAT CGGTATCTTG GATATCTACG GGTTCGAAAT
CTTTGAACAC AACTCTTTTG AACAAATTTG TATTAACTAT GTCAATGAGA AGTTGCAACA
GATCTTTATC CAGCTTACAT TGAAGGCAGA ACAAGACGAA TACGTCAAAG AGCAAATCAA
GTGGACACCT ATCGACTACT TCAACAACAA GGTTGTCTGT GACTTGATTG AAGCCACGAG
ACCTCAGCCG GGCTTGTTTG CAGCTTTGAA CGATTCTATC AAAACGGCTC ACGCTGACTC
AGATGCTGCC GACCAGGTGT TTGCCCAAAG ATTAAGCATG GTGGGAGCCA GCAATCGTCA
CTTTGAAGAT CGTAAGGGCA AGTTTATCAT CAAACATTAT GCTGGTGATG TCACCTATGA
AGTAGCAGGT ATGACAGACA AGAACAAGGA TGCGTTGTTG CGTGATTTGG TGGAATTGTT
ATCTACATCA GCCAATCCAT TCGTCAACCA AGTTTTATTT CCTCCTCTGC TCTTGGCATC
GATCACTGAT TCAAAGAAGA GACCAGAAAC AGCGTCGGAC AAGATCAAGA GAAGTGCCAA
CGATTTGGTG GGCACCTTAT CAAAATGTCA GCCTTCATAT ATCAGAACCA TCAAGCCAAA
TCAGACCAAA CGTCCTAAGG AATACGAAAA CCAACAAGTT CTTCACCAGA TTAAATACTT
AGGTTTGAAG GAAAATGTGA GAATTAGAAG AGCCGGTTTT GCTTTCCGTA CAACGTTTGA
GAAATTTGTC CAACGTTTCT ATTTGCTCTC TCCCGCTACA GGTTATGCTG GTGACTATAT
CTGGCGTGGA GACGACATTT CTGCTGTCAA AGAGATCTTA AAATCTTGTT TCATTCCTGC
TACTGAGTAT CAGCTTGGTA CGACCAAGGT ATTCATCAAG ACACCAGAAA CCTTATTTGG
TTTAGAAGAC ATGAGAGACA AGTACTGGCA CAACATGGCT GCTAGAATCC AAAGAGCATG
GAGGAGATAC GTCAAGCGTA AGGAAGATGC TGCTCGTACA ATTCAGAGTG CCTGGAGAAT
CAAGAAGCAC GGGAACCAGT TTGAACAGCT TCGTGATTAT GGTAATGGTC TCGTCCAGGG
CAGAAAAGAA CGTCGTAGAA TGTCCATGTT GGGATCGCGT GCTTTCATGG GTGACTACTT
GGGATGTAGC GATACCAGTG GATATGGTAG ATTCATTGTT ACCCAGACAG GTATTAACGA
AAAAGTTGTA TTCTCGGGGA GAGGCGAGAT TTTGTTGTCC AAATTTGGTA GATCGTCAAA
GAGATTGCCT CGTATATTTG TTGTCACCAG AACAACCATA TTTATCATTG CTGAAGTCTT
GATTGAGAAG AGATTGCAAT TGCAATCAGA ATTCAAGATT CCTATTTCTG GCTTGAACTA
CGTTGCGTTG TCTCATTTGC AAGATAATTG GGTTGCTTTG TCACTTCACT CACCTACCCC
TTCTACACCT GATGTGTTCA TTAGCTTAGA TTTCAAGACC GAGTTTGTCA CCCACTTGAA
GAAAATCAAT CCTGGGTTGA CCATTAATAT TGGTACTACG GTTCAGTACC AGAAAAAGCC
AGGCAAATTT CACACGGTCA AGTTTATCAG TGGTAATTCA TCTGATGTAC CTGAGTACGG
AGATGTTTAC AAGTCTGGTA CGGTCACGGT CAAGCCAGGT TTACCTTCTA GCAGTAGAAA
TCCAAAACGT CCAAGAGGAA AGTCTGGAAA GGTCGATTAT TCCAAGTATT ATAACCGAGG
AGTCAAGAAA CTGTTCCCTG TACCTTCTGC AAGACCTACT GCTGCATCTC AACCTTCATA
CAAAAGTCCA GTAGAACAGT CTTACCAGCC TCAAGTTCTT GCCTACCAGA CTCCACGCCC
AGAAGAAGCT AAGCCAGTTC AACGTAAAGC TCCTCCGCCA GCTCCTGTAG TCCAGAATCA
ACCGCAAAGA CAGCCTCAAG CTATCGAGCC TGTAAGACCA GTAAAGAAAA CTGCTCCAAG
TCCTCCAGTA AGAAAAACTG CTCCCCCACC ACCTCCGCCA CCTCCAGCTT TGTCAGCACC
TGCTAAGCCC AAGTTCCCGA CTTACAAGGC AATGTATGAC TACGATGGTT CAGTAGCTGG
TTCTATACCT CTCGTTAAGG ATGTCGTCTA CTATGTAGAG AGCATTAATG GAAAGTGGGG
TTTGGTGAAG ACTTTGGACG AGTCTAAAGA AGGCTGGTCT CCAATTGATT ATCTATCTCA
ATGCGAACCA CCTAGTAGTT TGTTCGGTGC TGCTAACCCT CCTTCTCGTC CAGTTGCACC
TTCACAGCCG AAGGTCCAAT CCAGAGAGTC GACGGTTGCT AGTGCTGCTG TTTCGAGTAG
CACGCCTGCA TCGACTGTTC TGAACGGAAG CTTGAGTAAT GGGTTGGCAG AAGCTTTGAG
GGCCAAAAAG ACTGAAGAAA CTACGTTGGC TGGCTCTTTA GCTGATGCCT TGAAGAAGAG
ACAGGGTGCT ACCAGAGACG ACAGTGATGA CGAAGATGAT GACGACGATG ATTGGTGAAT
GAGGTCTACA TTCTATATTG ATAGACACTG ACTGTTTTCT ATGTTGAATA AATTACGCTC
AATACAGTGT ACAGAAGTAT ACATCATTCT GTTGTAAATT CATTCATTCA TTATTTCACA
TATTAAATAC ATATTAAAGT TTGTT
|
|---|
| Protein sequence | MAIVKRGGRT KNKTQQQAPA KSGIKKAEFD LHKSKEVGVS DLTLLSKITD EAINDNLHKR
FMNGTIYTYI GHVLISVNPF QDLGIYGPET LSKYRGRNRL EVPPHVFAIA ESMYYNLKSY
NENQCVIISG ESGAGKTEAA KQIMQYIANV SVDSGNAEIS KIKDMVLATN PLLESFGCAK
TLRNNNSSRH GKYLEIQFSE SNHQPIAAHI TNYLLEKQRV VSQITNERNF HIFYQFTKHC
PTQYQQQFGI QGPETYVYTS SAKCINVDGI DDSKDLDETL SAMKIIGLTE LEQNNIFRMI
ASILWIGNVS FVEDESGNAA IRDDSVTQFV AYLLEVNPEI LKKAIVERVI ETTHGMRRGS
TYHVPLNIVQ ATSVRDALAK GIYNNLFEWI VERVNVSLKG ASQSSKTIGI LDIYGFEIFE
HNSFEQICIN YVNEKLQQIF IQLTLKAEQD EYVKEQIKWT PIDYFNNKVV CDLIEATRPQ
PGLFAALNDS IKTAHADSDA ADQVFAQRLS MVGASNRHFE DRKGKFIIKH YAGDVTYEVA
GMTDKNKDAL LRDLVELLST SANPFVNQVL FPPSLLASIT DSKKRPETAS DKIKRSANDL
VGTLSKCQPS YIRTIKPNQT KRPKEYENQQ VLHQIKYLGL KENVRIRRAG FAFRTTFEKF
VQRFYLLSPA TGYAGDYIWR GDDISAVKEI LKSCFIPATE YQLGTTKVFI KTPETLFGLE
DMRDKYWHNM AARIQRAWRR YVKRKEDAAR TIQSAWRIKK HGNQFEQLRD YGNGLVQGRK
ERRRMSMLGS RAFMGDYLGC SDTSGYGRFI VTQTGINEKV VFSGRGEILL SKFGRSSKRL
PRIFVVTRTT IFIIAEVLIE KRLQLQSEFK IPISGLNYVA LSHLQDNWVA LSLHSPTPST
PDVFISLDFK TEFVTHLKKI NPGLTINIGT TVQYQKKPGK FHTVKFISGN SSDVPEYGDV
YKSGTVTVKP GLPSSSRNPK RPRGKSGKVD YSKYYNRGVK KSFPVPSARP TAASQPSYKS
PVEQSYQPQV LAYQTPRPEE AKPVQRKAPP PAPVVQNQPQ RQPQAIEPVR PVKKTAPSPP
VRKTAPPPPP PPPALSAPAK PKFPTYKAMY DYDGSVAGSI PLVKDVVYYV ESINGKWGLV
KTLDESKEGW SPIDYLSQCE PPSSLFGAAN PPSRPVAPSQ PKVQSRESTV ASAAVSSSTP
ASTVSNGSLS NGLAEALRAK KTEETTLAGS LADALKKRQG ATRDDSDDED DDDDDW
|
|---|
| |