Gene PICST_79036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_79036 
SymbolATP7 
ID4839881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp134098 
End bp134794 
Gene Length697 bp 
Protein Length175 aa 
Translation table12 
GC content43% 
IMG OID640391196 
ProductATP synthase d subunit 
Protein accessionXP_001385720 
Protein GI126138394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG TTGCCAAGAC TGCTGCCACC AAGTTGAACT GGACCAAGGT CATCTCGTCC 
CTTGGATTGA CTGGATCCAC TGCTGCCTCG TTAACTGCAT TCAAGAAGAG ACACGACGAA
GCCAAGAAAG ACCAATTGAC TTTAGCACAA CAACCTACCA CAGTCGACTT TGCCTACTAC
AGATCCGTCT TGAAGAACAC CAAGGTCATC GATGAAATCG AAAAGGCTGT TAACGCCTAC
AAGCCAGTCA CTATTGACGT TTCAAAGAAC TTGAAGAACA TTGAAATCTT TGAACAGAAG
GCTATTGAAA ATGCCAAGTT GACTGAAAAG TCTGTGTTGG AAGAAATTGC CCAATTGCAA
ACCACCCTTA AGGACATTGA AGGTGCCAGA CCATTCGACC AATTGACCGT CGACGACGTT
GCTAAGGCCA GACCAGACTT GGATGAAAAG GTCAAGTACA TGGTCAAGAA CGGTAAGTGG
GATGTTCCAG GCTACAAGGA AAAGTTCGGT GACTTGACTG TCATGTAAGA GCAAAGAAAG
CAAGCAAGCA AAGCTGGTAA GGAAGCAAAG TAAGCGAGCA AAGCAAGCAT AGGTTTTCAT
GTTATTTATT TCTGATTTCC CATTCATTTT CCGATTGTTC GAGTTTAGCA TGCCATAATC
GTTCAAAATT ACTCAACAAG AATATACATT AGAATAG
 
Protein sequence
MSSVAKTAAT KLNWTKVISS LGLTGSTAAS LTAFKKRHDE AKKDQLTLAQ QPTTVDFAYY 
RSVLKNTKVI DEIEKAVNAY KPVTIDVSKN LKNIEIFEQK AIENAKLTEK SVLEEIAQLQ
TTLKDIEGAR PFDQLTVDDV AKARPDLDEK VKYMVKNGKW DVPGYKEKFG DLTVM