| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78689 |
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| Symbol | SSC1.2 |
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| ID | 4840318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1634183 |
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| End bp | 1637118 |
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| Gene Length | 2936 bp |
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| Protein Length | 647 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391633 |
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| Product | mitochondrial heat shock protein of the HSP70 family upregulated 15 fold under aerobic conditions |
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| Protein accession | XP_001386012 |
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| Protein GI | 126138978 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AACATCTACA ACTCCGTTTC ACTCCAAACA ACAACGATGT TAGCCGCTAG AAACTCGTTC
AAGTCTGCTG CCGCACGTGC TCCAGCAGCT GCTGTCCGTT TCAACTCTTC TGCTGCTCCT
TCCGGTCCCG TTATCGGCAT TGATTTGGGT ACCACCAACT CTGCTGTAGC CATCATGGAA
GGTAAGGTTC CAAAGATCAT TGAGAACGCC GAAGGTGGCA GAACCACTCC TTCCATCGTT
GCCTTCACCA AGGAAGGCGA AAGATTGGTT GGTATCCCAG CAAAGCGTCA AGCTGTTGTC
AACCCAGAGA ACACTTTATT TGCCACGAAG CGTTTGATTG GTCGTCGTTT CGAAGACCAG
GAAGTGCAAA GAGACTTGAA TCAGGTTCCT TACAAAATTG TCAAGCACGA CAATGGTGAT
GCCTGGATTG AAGCCCGTGG CGAGAAATAC TCTCCACAAC AAATTGGTGG TTTCATCTTG
AACAAGATGA AGGAAACCGC TGAAGCAAAC CTCGGTAAGC CAGTCAAGAA CGCCGTCGTT
ACCTGTCCTG CTTATTTCAA CGACGCCCAG AGACAAGCTA CCAAAGATGC CGGTAAGATT
GTCGGTTTGA ATGTGATGAG AGTCGTCAAC GAACCTACTG CTGCTGCCTT GGCCTACGGT
TTGGAAAAGA ACGACGGTCA AGTTGTCGCC GTCTTTGACT TGGGTGGTGG TACTTTCGAT
ATCTCGATCT TGGACATTGG TGCTGGTGTT TTTGAAGTCA AATCGACCAA CGGTGACACC
CACTTGGGTG GTGAAGATTT CGACATTGCT GTAGTGAGAA ACATTGTTGA CAACTTCAAG
AAGGAGTCTG GTATCGACTT AGAAAAGGAC AGAATGGCTA TCCAGAGAAT CAGAGAAGCC
GCCGAAAAGG CCAAGATCGA ATTGTCTTCG ACTGTCTCGA CCGAAATTAA CTTGCCTTTC
ATCACCGCTG ATGCTTCAGG TCCAAAGCAC ATCAACCAGA AGATCTCCAG ATCCCAATTC
GAGACCTTGG TTGAACCTTT GGTTAAGAAG ACTGTTGATC CATGTAAGAA GGCCTTGAAG
GATGCCGGTT TGTCCACTTC CGACATTTCG GAAGTCATCT TGGTTGGTGG TATGTCGAGA
ATGCCTAAGG TCATTGAAAC CGTGAAGTCT ATCTTTGGTA GAGAGCCATC TAAGGCTGTC
AACCCTGATG AAGCTGTGGC TATGGGTGCT GCCATTCAAG GTGGTATCTT GGCTGGTGAA
GTGACAGATG TTGTATTGTT GGATGTCACC CCATTGTCAT TGGGTATTGA GACCATGGGA
GGTGTTTTCG CCAGATTGAT TTCTAGAAAC ACCACCATTC CAGCCAAGAA GTCGCAGATC
TTCTCCACTG CTTCGGCCGG TCAAACTTCG GTCGAAATTA GAGTTTTCCA GGGTGAAAGA
GAATTGACCA GAGACAACAA GTTGATTGGT AACTTCACAT TGTCTGGTAT CCCACCTGCT
CCAAAGGGTG TTCCACAGAT CGAAGTCACC TTCGACATTG ACACTGATGG TATCATCAAG
GTCTCTGCAC GTGACAAGGC CTCTAACAAG GACGCCTCCA TTACCGTTGC TGGTTCCTCC
GGTTTGTCTG ACTCTGAAAT CGAAAAGATG GTCAACGATG CCGAGAAGTT TGCCGAATCC
GACAAGGCTA GAAGAGAAGC CATCGAATCC GCTAACAGAG CCGACCAATT GTGTAACGAC
ACCGAAAACT CCTTGAACGA ATTCAAAGAC AAGTTGGAAA CTGCTGATGC CGACAAGGTC
AGAGAACAGG TTGCCGCTTT GAGAGAAATT GTCCTCAAAG CTCAAGCCGG TGAAGAAGTT
GATGCCGCTG AATTGAAGAC TAAGACCGAG GAATTGCAAA ACGAGTCCTT GAAGGTCTTT
GAAAAGTTGT ACAAGAACAA CGATTCCTCT TCAGAAAACT CTTCTGAACC AAAGAACTAA
GCAAGTGGGT GGTGACATGA AAATTCTTCT ATTATTAACT TGTATCATGA TTCATGACCC
TGACTAATTA TTTATTTGTA CATAATCTAG TTTGGGTTTT TTTCTTGGTG AATGCACCTA
CTTCTCTCTT GTAAATATGT TTATAACACT ACATAATGAA CACCTTTAAG ATGTACCTAT
TTATTATCAT TAATAGAAAG GAAATGTAAC TAGTCTCCTT GTAGTAAATC TAGACAAATC
TATCTTTCAA GTCGTTAGTG AGTTAAGCCT ATAATTGTGA AGAAGGCTAT TGCTCTATAC
CTTCAACTCA GTTAGACTGT GTTGAATGCC ATGCGATCGC CTCATAGGTC CCCTACCAGA
AGATTCTGGT TTCAACGTAT GACGTCTGAT TATGGTACCG TAGGTTCTGG TGAGTGGTTC
GGACAGATTG CCATAGGTGC TAGCAGATCG TTTCGATAAA CTTCTTGAGG CTATAGATTC
ACTAATAGAA GACAAAGAAT AAACGGAGGA TGAAGCGACC AGCTCTCCTT CAGATTCATA
TTCGAGCATT TCACCCAAGA TAGATCTTCT GTTCAACTGG TTGTGGAATT CCTCTTCTTC
CATACTAGGA TTAGAATCCC GACCCTGTGA TGCTATGATG GTTGGAGTAT CCGATCTTTC
TTCAGAAGAG CTGCTCAAGT TGGTGTTGGT TTGTGAGACC ATGTCGCTCA AAGAAATCTC
TTTGAATGAA GCCTCCTCTG ATGCCAAAGG CAATCTACTT TCTGTTTCGC TGATTTCTGT
TTCTGGTTCT ACACCTTCTT CGGCTGCAAA AACGGGTTCG GAATTAATAG ATTTGTTTTC
AAGAAGGTTT CTGAAGATAT TGATTTCTTG ACGAAGCATT ATACGCTTAG AAAGAACGTG
AGCCAAATAT CTTCTCCAAA TTTCGAGTGC AACGGCATTG TCATCTACTA TGGCCG
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| Protein sequence | MLAARNSFKS AAARAPAAAV RFNSSAAPSG PVIGIDLGTT NSAVAIMEGK VPKIIENAEG
GRTTPSIVAF TKEGERLVGI PAKRQAVVNP ENTLFATKRL IGRRFEDQEV QRDLNQVPYK
IVKHDNGDAW IEARGEKYSP QQIGGFILNK MKETAEANLG KPVKNAVVTC PAYFNDAQRQ
ATKDAGKIVG LNVMRVVNEP TAAALAYGLE KNDGQVVAVF DLGGGTFDIS ILDIGAGVFE
VKSTNGDTHL GGEDFDIAVV RNIVDNFKKE SGIDLEKDRM AIQRIREAAE KAKIELSSTV
STEINLPFIT ADASGPKHIN QKISRSQFET LVEPLVKKTV DPCKKALKDA GLSTSDISEV
ILVGGMSRMP KVIETVKSIF GREPSKAVNP DEAVAMGAAI QGGILAGEVT DVVLLDVTPL
SLGIETMGGV FARLISRNTT IPAKKSQIFS TASAGQTSVE IRVFQGEREL TRDNKLIGNF
TLSGIPPAPK GVPQIEVTFD IDTDGIIKVS ARDKASNKDA SITVAGSSGL SDSEIEKMVN
DAEKFAESDK ARREAIESAN RADQLCNDTE NSLNEFKDKL ETADADKVRE QVAALREIVL
KAQAGEEVDA AELKTKTEEL QNESLKVFEK LYKNNDSSSE NSSEPKN
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