Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77026 |
Symbol | |
ID | 4837908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 317830 |
End bp | 318756 |
Gene Length | 927 bp |
Protein Length | 256 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389223 |
Product | predicted protein |
Protein accession | XP_001383690 |
Protein GI | 126134331 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.262967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AATTGATTTC TCCTTCTTTC TTCAGACTCA ATTAACCACC CATCATGTTG TCAAGAGTGT TGATTCGTTC TGCTGCTGTC AGAACTGCTC TTCCCAGAGC CACCCCGGTT TTCAGACCAT CTATAGTCGG AACTCGTTTC TATTCGTTCA AGCAAGAAGA CCAACCCAGA ATCAGAATCG GCTCCACCGC TCCAAACTTC GAAGTCAACA CCACTTCTGG CAAAATTGAC TTCCATAGCT ACATCGGCGA CAATTGGGTT GTTCTTTTCA GTCACCCAGC TGATTTCACT CCAGTCTGTA CCACCGAGTT AGGTGCATTT TCCAAGTTGA AGCCGGAATT CGATAAGAGA GGTGTCAAGT TGATTGGTCT TTCCACCGAA GGTGTCGATA GCCACAACCA ATGGATCAAG GATATCGAGG AAGTTGTCAC CGGTGGTGAA AAGTTTGGCT TCCCTATCAT TGCCGATTCC ACCAAAGAAG TTGCTTATAA ATATGATATG GTTACTGAAG ATGACTTCAA GAATCTCGAA TCCGGAGTTG TATTCACTGT CAGATCTGTC TTCGTCATTG ACCCAGCCAA AAAGATTAGA TTGACCATGA CATACCCTGC TTCTACTGGT AGAAACACTG CTGAAGTATT GAGAGTTGTT GATGCTTTGC AATTGGCTGA CAAGAGAGGC ATTGCTACTC CCGTCGACTG GACCGAGGGC CAGGATGTCA TCATTCCTCC TACAGTTTCT AACGAGGCTG CTAAGGAAAA GTTTGGAAGC TTCAAACAAG TCAAGCCATA CTTGAGATTC ACCAAGTTGG ACTAAACGGG AACTCAGATA TCTTATTGTA TGATAAATGA TTATATGTAC TTATATGATT ATATATATAT AGCTCTTGGT ATGTGCAGAT AACAAATATA TTCTATCTTA TGATGGC
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Protein sequence | MLSRVLIRSA AVRTALPRAT PVFRPSIVGT RFYSFKQEDQ PRIRIGSTAP NFEVNTTSGK IDFHSYIGDN WVVLFSHPAD FTPVCTTELG AFSKLKPEFD KRGVKLIGLS TEGVDSHNQW IKDIEEVVTG GEKFGFPIIA DSTKEVAYKY DMVTEDDFKN LESGVVFTVR SVFVIDPAKK IRLTMTYPAS TGRNTAEVLR VVDALQLADK RGIATPVDWT EGQDVIIPPT VSNEAAKEKF GSFKQVKPYL RFTKLD
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