Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_74808 |
Symbol | |
ID | 4851530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2072213 |
End bp | 2072857 |
Gene Length | 645 bp |
Protein Length | 182 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393238 |
Product | predicted protein |
Protein accession | XP_001387633 |
Protein GI | 126274763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.254986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0942071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCAAT TTATCGAACA TAGCCATTTG TACAACCATG ACTTTTCCAC GGCTTCTTTG GCCTATTTGA ACCGATATCC TAATCCGTAT GCCAAACATG TTAAGAGCAG TGACACTTTG GAACATTGTA TTGATGAAGA TGGCAGATTA AGGACCACAA GATTGGTGGT CAAGACGGGA AGGTTGCCTC AGTTCATTAA GCCATTTTTG GGTACCAGTT TGGACTCGTG GATTATTGAA AAGAGTGTGA TTGATCCCAA GGGTAAGATT CTTCTTTCGT ACACTGCGAA TGTAGATCAT CGCAAGCTAC TTAAAGTCGA GGAGTATTTG AAGTACTCGT GTGAAGATGG AATCAACACA TTGGTTGAGA GCAAGGTCAA GTTCTCGTCC AATTTTGTAG GCTTGAAGCA GAAGATTGAG CAATGGAGTC ACAACAGGTT TTTGTCTAAC ATCTCTAACT CTCGCGAGGG CTTGAAGTTT GTCATGAACA GGTTGAAGGA AAGAGGTGGG CTCTGGTACA GAGAGAGGGA TACATCTAGT TTATTGTAGT TGTCTGAGCA TTGAGCTTAG TATGATATGA TCCGAGGCTA TTGGCCCATT ATGACGTTAT GGAAACATGT ATATAAGAAT GCACGGTATA GTGTG
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Protein sequence | MVQFIEHSHL YNHDFSTASL AYLNRYPNPY AKHVKSSDTL EHCIDEDGRL RTTRLVVKTG RLPQFIKPFL GTSLDSWIIE KSVIDPKGKI LLSYTANVDH RKLLKVEEYL KYSCEDGINT LVESKVKFSS NFVGLKQKIE QWSHNRFLSN ISNSREGLKF VMNRLKERGG LWYRERDTSS LL
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