Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_73391 |
Symbol | |
ID | 4839799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1256577 |
End bp | 1258780 |
Gene Length | 2204 bp |
Protein Length | 712 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391114 |
Product | predicted protein |
Protein accession | XP_001385934 |
Protein GI | 126138822 |
COG category | [R] General function prediction only |
COG ID | [COG5354] Uncharacterized protein, contains Trp-Asp (WD) repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGCAATATTC CAGAATGTCC TTGACAGAAG CTGAGTATCA CGAGCTTGAG AAGCAAGTTA ACTTGGACGA CATTGACTTT TCCGACTTGG AAGAGCAATA TGAAGTCGAT GTCGGCTTAG ACAATTATGT TGTAGTAGAC GGTGCCCCAA TTGCACCAGA GGCCAAGGTC CCTGTATTGA TCAAGGTCTT AAAGAAGTTG TTCAACACTG TAGGAAAGGT TGTTGAAGGC GACGAAGGAA TTTACATGCC TTTGGAAGAC GGAAAATCGA AGGGTTACTT GTTTGTTCAG TTTGAAACTT CGGAAATGGC CGAAGCTGCA ATCAAGCAGT TGCATGGCAA AAAGTTAGAT CAGAAGCACA GATTGCTTGT CAACAGATTG TCTGATATCG AGAAATACGG TGTAGAAGGC AATGTTGCTG CCGAATTTGT AGAACCAGAG TTACCTCCAT TCAAGAGCCA CGGCTACTTG AAGTCATGGC TTCAGGATCC TCAGGGCAGA GACCAAATAG CCTTGCACCA TTCTGAGACA TTTGGTGTTT TCTGGAACAA GAAGAAGAGC GACCCCGAAC CTGTCTTTGA GCCAAGAAAG TTCTTCACCT CGAAATACGC CAAGTTCTCT CCAAAGGGTA CCTACTTGTT CTCTATCCAT CCCCAGGGTG TTCAGTCTTG GGGGGGAGCT GATTTCTCCA GCATTGACAA ATTCATGCAC AACCAAGTCC GTTTGGTTGA CTTTTCCCCC AACGAAAAGT ATATGGTGAC TTTGTCGCCA CTTCCGATCA CTGCACCTGA TTCTGCTGCT GAAAGAGCTG TTTTCCCCTT TGGACCAGAG TCTTATGGCC ACAAGTTGGT CATCTGGGAC TTGACCACTG GTGAACCAGC TAGAACTTTT GCCTTGCCTC CCCACTTAGA AGGACAGAAG GAAATGCCAT GGCCATTGGT CAAATGGTCC CATGACGATA AGTACTGTGC TCGTCAAGGT CCTGGTGCTT TAGCTGTTTA CGAAACCCCA TCGTTCCAGT TGTTGGACAA GAAGTTGATC AAGATTGACG ACATTGTCGA CTTTGAGTGG GCACCTGCTG GCGTCCATCT TGCCAATAAC AAGTCCGAGA ACGGCCACCA CTTGTTGTCG TACTGGACTC CTGAATCCAG TAACCAAACT GCTAGAGTCG CTGTGATGCA AATTCCAACG AGACAGATCC TCAGAACCGT CAACTTGTTC CAGGTTAGCG ACTGTAAGAT GCACTGGCAA AGCGAAGGTA AACTCTTGTG TGTAAAGGTA GACCGTCATA CCAAGTCTGG TAAGACCATC TTTACCAACT TAGAGTTCTT CAAGACCACT GAAAAGGACA TCCCTGTAGA GAAATTGGAG TTGAAGGAAA TCGTTATCAA CTTCGCCTGG GAACCAAAGT CCGAGAGATT TGTTATCATC TCCAGATTAG ACGATGGCAA CCTCAACTCC GCCATCCCTA AGAATATCAT TGACTTCTAC GCTCCAGATG TGAATGGTAA GGGTAAGTCT GCCACATCTG TATACAAGTC GTACAAGACC ATTACTGACA AGCACTCTAA CACTGTCTTC TGGTCACCAA AGGGTAGATA TGTTGTTGTA GCCACCATCT CCAGAAGTAA CGGTGAGATC GAGTTCTTTG ATGTTTCGTT TGATGACTCT AACAAGAACG CTCCAGCTAA CGTCAAGTTG TTGAAGAATG ACAAGTTCTC TGGTATGACG AACATCAGTT GGGACCCATC TGGTAGATTT GTAGCAACTT GGTCGTCTTC GTGGTTACAT ACTATCGAAA ACGGTTACAA GTTATACGAG TTCACAGGTA ACTTGTTGAG AGATGACTCC ATCGATCAAT TCAAGGAATT TATCTGGAGA CCAAGACCAG CCTCTTTGTT GAACTCTGCC GACAGAAAGA AGGTCAGAGC CAACTTGCGT GAGTACAGTG CTCAATTCGA AGAGTCTGAC GCCATGGAAG CTGATGCTGC TCTTAGAGAA TTGATCTATG CCAGAAGAAG AGCCTTGGAA GACTGGAAAG CCTACAGAGC TAAACACGCC AGCAAGGCTG TCAAGGCTAA TGAGGTTCAA GCTGAAATCA TTGAAGAGAT CAAGGAGGAG ATCATTGAAG AGAAGGAAGA GATTGTTGAG TAATCTCACT AATTGTCTTC ATACTATACA ATCATACATT ACTAATCTTA GAAA
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Protein sequence | MSLTEAEYHE LEKQVNLDDI DFSDLEEQYE VDVGLDNYVV VDGAPIAPEA KVPVLIKVLK KLFNTVGKVV EGDEGIYMPL EDGKSKGYLF VQFETSEMAE AAIKQLHGKK LDQKHRLLVN RLSDIEKYGV EGNVAAEFVE PELPPFKSHG YLKSWLQDPQ GRDQIALHHS ETFGVFWNKK KSDPEPVFEP RKFFTSKYAK FSPKGTYLFS IHPQGVQSWG GADFSSIDKF MHNQVRLVDF SPNEKYMVTL SPLPITAPDS AAERAVFPFG PESYGHKLVI WDLTTGEPAR TFALPPHLEG QKEMPWPLVK WSHDDKYCAR QGPGALAVYE TPSFQLLDKK LIKIDDIVDF EWAPAGVHLA NNKSENGHHL LSYWTPESSN QTARVAVMQI PTRQILRTVN LFQVSDCKMH WQSEGKLLCV KVDRHTKSGK TIFTNLEFFK TTEKDIPVEK LELKEIVINF AWEPKSERFV IISRLDDGNL NSAIPKNIID FYAPDVNGKG KSATSVYKSY KTITDKHSNT VFWSPKGRYV VVATISRSNG EIEFFDVSFD DSNKNAPANV KLLKNDKFSG MTNISWDPSG RFVATWSSSW LHTIENGYKL YEFTGNLLRD DSIDQFKEFI WRPRPASLLN SADRKKVRAN LREYSAQFEE SDAMEADAAL RELIYARRRA LEDWKAYRAK HASKAVKANE VQAEIIEEIK EEIIEEKEEI VE
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