| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72313 |
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| Symbol | |
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| ID | 4839332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1239492 |
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| End bp | 1242079 |
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| Gene Length | 2588 bp |
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| Protein Length | 758 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390647 |
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| Product | predicted protein |
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| Protein accession | XP_001385245 |
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| Protein GI | 150865859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.502969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.112596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAACAACAGC TAAGTCTGGA TCGGAATTGT TTGTAAAGTC CAGTGCAAAT CTAATTGTGT
GTATACCATA CTGTGTGTCT TTTCAGACTT CAATTCGGTA GCATATAACG ATTTTTCATC
GGAAACAGAT ATTTTCACTT CAACAGTCAA CATTTCCAGA ACTAGAACAA TTAGTAGATT
CTGTAGATGT CGCTGACTTT AAGGAAAAGA GGGCCAAAAA AGGGCCAGAA CGCCGTTGGC
AATTCTGCTG CCCAAGAAGA TGACGACTTA AAGAAGCTCC GCGAGTTGGA AGAAGAAGCT
CGTGGATTCA AAGAGCCAGA GTACAAGTAC CAAGTAGCTC TTGCAGCCAT CACCATATTG
GCCGCATACA CTCGTTTCTA TCACATTAGC ATACCCGACA AAGTTGTGTT TGACGAAGTC
CATTTCGGTA AGTTTGCCTC GTATTACTTG GAAAGAACGT ACTTCTTTGA TTTGCACCCT
CCTTTTGCCA AGTTGCTTAT AGCCTTTGCT GGTTGGTTGA TTCGTTACGA TGGTGCCTTT
AAGTTCGAGA ACATTGGCGA CTCCTACATC ACCAACAAAG TGCCCTACAT TCCCTTGAGA
GCACTTCTGG CTATTCAGGG TACGCTTACA GTACCTGTGA TGTTTTTGAC AATGAAGACG
TTGGGATTTT CTGTTGCTGG CTGTCTTTTC GCAGCTCTCA TAGTCTGTTT CGACAATGCC
CATGTAGCTG ATTCTAGATT AATTCTCTTG GATGCCACTT TGATCTTCGC TGTTGCCTTG
ACTATTTATG CGTACTCCAA GTTCCTGACA TACAGAAAGC AGCCCTTCTC CCAGAAGTGG
TGGACATGGT TGACAGCTAC TGGAGTGAGT TTATCTTTGG TTATTTCTAC AAAATATGTA
GGTGTGTTCA CTTATGTGAC GATCGGCATT GCTGTAATCC ACGAGTTGTG GATTTTGTTG
GATTATCAGA AGGGATTGAC AATTCCTGAG TTTTCGAAGC ATTTTGCAGC CAGATTGTGG
TCATTGATCA TCATGCCCTT CATTATCTAC TTGTTCTGGT TTTACGTGCA TTTTGCCATT
TTGACCAAAT CTGGCCCTGG TGACAATTTC ATGTCAGCTG AGTTCCAGGA AACTTTGCTC
GAATCCCCTA TGGCTAAATT GTCCAAGAAC GTTCACTATA ACGATCTTAT CACCATAAAA
CATAAAGATA CTGACGCTTT CTTGCACTCG CATTTACACT CATATCCATT GCGTTATGAG
GATGGAAGAG TCTCGTCCAA TACTCAGCAG GTTACTTGTG TTTTTGACCC AGACAGCAAA
GAAGCCGAAG ACGTCAACAA CCACTGGGAA ATTGTTCCTA GCTCCAAAGA CGTCGCAAGA
GGTACTGATG TGTACACCAA CGATGTTGTC AGGTTCAGGC ATGTAGGAAC TGGTGGGTAT
TTGCTTGCCC ATGATGTTGC TTCCCCATTA AAAGCTACAC ATGAAGAGTT CACCATTGCT
TACGGCGAAG ACGCTGCTGT GACCAAGTTC AACGAGACTC TCTTCAGATT GAGATTCGGT
GGATCCGGTT CTACCAAAAA CAAAAACAAA AGGAGAGTCA TCAAGACTAA AGGTACACCA
TTGCGTATTA TCCATGTAGA CACCGTAGTG GCCATGTGGA CACACGACGA TGAAGTCTTG
CCAGAATGGG GTTTTGGCCA TCAGGAAGTC TCTGGTAACA AAAAGACGCA AGACTCTGAC
AACGTCTGGA CTATCGACGA CATTGTAGAC ATGGACCCTA TAGATCCAAG ATCCAAGTAT
GTACCCAAGC AAGTCAAGAC GTTGTCATTC TTTAAGAAAT GGTGGGAATT GCAAGGATTG
ATGTTCAAGC ACAACAATCA GTTGTCTTCT GAACACCCTT TTGCATCACA GCCCGAAACC
TGGCCATTGG CTTTGTCCGG TGTATCTTTC TACAACGATA ACGACAACCG TAGACAGATA
TTCTTCACCG GTAATATTAT TGGATTCTGG TTGGAAGTTT GTTTCCTCTC AATCTATTTG
GGGTTGTTGT TGGCTGATCA AGTCACTCGT CGTCGTCATG TATACATTTT GAGTGACAGA
GCAAGATCCA AATTGTACAA CACATTGGGA TTCCTCTTTG CCGGATGGGG TGCTCATTTC
TTCCCCTTCT TCTTAATGAA TCGTCAAAAG TTCTTGCACC ATTACTTGCC AGCCCATTTG
TTGGCTGCAT TGTTTTCTGG TGGTTTGGTC GATTTTATCT CGAGCAACAA TATTCGTGAT
TCTAACGGTC GCCCTACGGT GTACAACAAG ATCAAGAGCA CAGTCATTGT GACCGGATGT
TCCATCGGCA TTGTGTGGTT CTTCTTCTAC TTCAGACCAA TCACCTACGG TGATACCACC
TTGTCTGTTG AGGAGGTCAA GGCTAGACAA TGGTTGGACA TCAAGTTGCA CTACGCCAAG
TAGAAGAGCT TTCTTTGGAG GCATTATATA TATTGATATG GACCACTAAT TACACATTTC
TGGTGGATGA TGAATTACAG ACTTAGTAGA GTATGTAGTA CAGAATTGAA CTTGTACATT
GGCACTTC
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| Protein sequence | MSSTLRKRGP KKGQNAVGNS AAQEDDDLKK LRELEEEARG FKEPEYKYQV ALAAITILAA
YTRFYHISIP DKVVFDEVHF GKFASYYLER TYFFDLHPPF AKLLIAFAGW LIRYDGAFKF
ENIGDSYITN KVPYIPLRAL SAIQGTLTVP VMFLTMKTLG FSVAGCLFAA LIVCFDNAHV
ADSRLILLDA TLIFAVALTI YAYSKFSTYR KQPFSQKWWT WLTATGVSLS LVISTKYVGV
FTYVTIGIAV IHELWILLDY QKGLTIPEFS KHFAARLWSL IIMPFIIYLF WFYVHFAILT
KSGPGDNFMS AEFQETLLES PMAKLSKNVH YNDLITIKHK DTDAFLHSHL HSYPLRYEDG
RVSSNTQQVT CVFDPDSKEA EDVNNHWEIV PSSKDVARGT DVYTNDVVRF RHVGTGGYLL
AHDVASPLKA THEEFTIAYG EDAAVTKFNE TLFRLRFGGS GSTKNKNKRR VIKTKGTPLR
IIHVDTVVAM WTHDDEVLPE WGFGHQEVSG NKKTQDSDNV WTIDDIVDMD PIDPRSKYVP
KQVKTLSFFK KWWELQGLMF KHNNQLSSEH PFASQPETWP LALSGVSFYN DNDNRRQIFF
TGNIIGFWLE VCFLSIYLGL LLADQVTRRR HVYILSDRAR SKLYNTLGFL FAGWGAHFFP
FFLMNRQKFL HHYLPAHLLA ALFSGGLVDF ISSNNIRDSN GRPTVYNKIK STVIVTGCSI
GIVWFFFYFR PITYGDTTLS VEEVKARQWL DIKLHYAK
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