Gene PICST_70308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70308 
Symbol 
ID4837004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp510064 
End bp511124 
Gene Length1061 bp 
Protein Length297 aa 
Translation table12 
GC content43% 
IMG OID640388319 
Productpredicted protein 
Protein accessionXP_001382858 
Protein GI126132666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.80881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TACTTTTCAC TGGTTCAATA AATTTTTCAG TATTCTCATC TCATCCCATC TCATCGCGCA 
ACATGGTTAA CTACCAAACT TGGTTGAAGG AAATTGACGA CAACACCAGA CTTTCCAAGT
TGTCAATTCC AGGCACTCAC AACTCCGCTG CCTGTCACAC TGCTTTGCCA TCTGTCCAAT
GTCAGGGTAA ATCCGTCACC GACCAATTGA AGCATGGGGT CAGATTTTTG GATATCAGAG
CCGGCAGACA ATTGATTAAA AACGACGATC CTAAGCAAGA ATTGCAAGTT ATCCATGGCA
AGTTCCCTGT CAGAATTCCA TTCCCCATTC AATTAGAAGA TGTGTTGAAA GAAGTTTACG
ACTTCTTGGA CGACAACAAG TCTGAAACCG TTATTGTTTC GTTGAAGCAA GAAGGGTCAA
ATGACTGGGA CAACCCCAAT GACGAGTTCC CCAACTTGAT CTGGGAAAAG TACGTTGAGC
CTAACAAGGA CAAATGGTAT TTGAACACCG ACATTCCAAA GGTTGGAGAT GCAAGAGGTA
AGGCTGTTCT CTTCAGAAGA TTCGGAGTCA ACAACGAAGA CAGAAAAAGA GAGTTTGGCT
TCGACGCGGC TTCGTGGAAG TACAACACTA CTGATGACGA CCGTGGATCG TTTGTTGTCC
AGGACTTCTG TGAAGTCCAG AAGGCTGACG ACATTCCCAC CAAGATCAAC TACGTCAAAG
ACTTGGCCAA CAAGGCTAAG GACTATACCA AGGACAATGA CAACAAGTTG TTCGTCAACT
TCACGTCTGC TTCCAACTTC TTCGACCACG ACTGCTGGCC ACAACAGATT GCAAATGCCT
TGCTCAAGAG TGATGTCGCC GACAAATTCG AGAAGGGTGT TGGTATCATC GTGTTGGACT
ACGTTGAAAG CGACGACTGG AAGTTGTCCA AGAAGTTGGT TGACTCTAAC TTCTAATCTA
CTTGTATTTT TGCCTACTTG GTTTGTGACT ATGTAAGTAA GAAAAAATCA TGATGAATGA
TTCTACTAGT TATATCTCAA TATATGTTCA GATTGCTTTA C
 
Protein sequence
MVNYQTWLKE IDDNTRLSKL SIPGTHNSAA CHTALPSVQC QGKSVTDQLK HGVRFLDIRA 
GRQLIKNDDP KQELQVIHGK FPVRIPFPIQ LEDVLKEVYD FLDDNKSETV IVSLKQEGSN
DWDNPNDEFP NLIWEKYVEP NKDKWYLNTD IPKVGDARGK AVLFRRFGVN NEDRKREFGF
DAASWKYNTT DDDRGSFVVQ DFCEVQKADD IPTKINYVKD LANKAKDYTK DNDNKLFVNF
TSASNFFDHD CWPQQIANAL LKSDVADKFE KGVGIIVLDY VESDDWKLSK KLVDSNF