Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_70212 |
Symbol | AVT7 |
ID | 4837213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 440430 |
End bp | 442310 |
Gene Length | 1881 bp |
Protein Length | 449 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388528 |
Product | Vacuolar amino acid transporter 7 |
Protein accession | XP_001382317 |
Protein GI | 150863745 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCTTCTTT ACCTTCTAGT ATAAGGAGAG TGGAAAAGAC TATAACAAGA TCCAAATATA CTTGTTGTCT TTTACTGTGT GAAACATTTC ACGTTTGCGC TGCTGATTTA CCCGTACTTG ACAAGTCATC AGATATCCTA TAGACACAGC AGACATAACA TAATAGCAAA CCAAGAATTT GTATAAGCCT ATATCATCTT GCACTATCTA TCCCATTCCT ATACTTATAG CTGTCCAGAC CATTGACATC TAATAGACAT ATCGTAGACA ACACAGACAC ATAACATCCC TTGAGATTAA CACAAATATC ATAATAAAAT GCCCTCCGTC GACCAAGGTG CTTCCACCAT ATCATCTTCC ATTTCATTGG TGAAAACCAT CATTGGAGCA GGCTTGCTTT CAATGCCTCT CGCATTTTCC ACTGATGGTC TTGTTGCGGG AGTTCTCATT ATTCTCCTAG CAGCCTTCAC ATCAGGCTAC GGGCTCTTTC TTCAAGCCTA CACCTCCAAA TACGTACCAA CAGGACATGC TACTTTTTTC AACTTGTGTT CGGTGACTTA CCCCAGTTTG TCTGTAGTGT TTGACATTGC TATTGCCGTT CAATGTTTTG GCTGCGCCTT GTCGTACTTG GTTTTAATCG GAGACATAAC CCCAACCATC GTCACTTACG TTCCTTATAT AGACCCAGGC AACTACAGAA CATTCTGGAT CTTGGTTTCG ACACTTGTGT GTGTTCCCCT TTCGTTTCTC AAGAACTTAG ACTCGTTGAA GTACACCTCT GTGCTCGGAT TGGTGGCTAT TCTCTATATG TCGATTCTTG TCGTCAGCCA CTTCTTCATT GGTGATGTTC CTCAAGAACT CAAGGGCAAT ATTACCTTGA TGCCTCCCAA TGTTTCTGGT GTGTTCAGTA CGTTTTCGAT TATCGTGTTT GCTTTCACTG GCCACCAGAA CATGTTTTCC ATCGTAAATG AAGCCGGAGA TAAGTCGTTG TCCAGTCTTA CACGTCTTGT AAATAACGCC ATTCTCATCT CATCGGGTTT CTTCATCTTA GTCGGTATCA CCGGATATCT TACATTTGGT GATAACGTAA ATGGTAACGT AATTTTGCTG TACGCTGATG GATGGACTAC TGCCTTGGGA CGATTCTGTA TTGTCTTCAT GGTGATCTTC TCATTCCCCT TGATGATCCA CCCAGCTAGA ATCTCTGTTA ACAACATATT CTACTGGACC AAAATTAACG TATTTCATGG TCATGAAGAC ATAAATGCTA CTCTTACAAC TTCTGCTACA GAGAGCTCTA CCTTGTTAGG CAGTGACCCC AGCCAAGAAT CGTTGGAGAC AGCGGCTGCA AAGAAAGAAT CTCACATTGT GCCGTTCTCT CACAAAACTT TTGTTGTTAT CACTACCATC TTGTTGTTTG CCGGTTACAC ACTTGCCATT AGTATCACAT CGTTTGCGTT GGTGTTGGCC ATTGTAGGAG CCACTGGATC GACGGCCATC TCGTTTATTT TGCCAGGTTT GTTCGGTTAC AAGTTGATTG GCTCTGAGCT GGACGACCCT AGCATTCTTG AGACTGTTTT CAAGAACCTT TCTTTGGCTT TGACCATATG GGGCTTTGTG GTGATGGTGT TGTGTTTGTA CACCAGCTTA TTCTTGAACC AGGTTTAGAA ATGAGGGAGG CTACTTACTG AAAGACAGAA AACACAGAAG AAGAGACAAA AGAATCTACA GACAGAAGAC TAGAAGCCTT AGGGGTTTAC AGTTTAGATT GATTGGTTCA ATAAAATTCA CCAGGCCAAT TGAACGAACG CCGAGACTAC AGTACATATA ATATTTTTAT ATATGGGACC CATATAAATA GTATGAATTG GCGATTCTAA A
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Protein sequence | MPSVDQGAST ISSSISLVKT IIGAGLLSMP LAFSTDGLVA GVLIILLAAF TSGYGLFLQA YTSKYVPTGH ATFFNLCSVT YPSLSVVFDI AIAVQCFGCA LSYLVLIGDI TPTIVTYVPY IDPGNYRTFW ILVSTLVCVP LSFLKNLDSL KYTSVLGLVA ILYMSILVVS HFFIGDVPQE LKGNITLMPP NVSGVFSTFS IIVFAFTGHQ NMFSIVNEAG DKSLSSLTRL VNNAILISSG FFILVGITGY LTFGDNVNGN VILSYADGWT TALGRFCIVF MVIFSFPLMI HPARISVNNI FYWTKINVFH GHEDINATLT TSATESSTLL GSDPSQESLE TAAAKKESHI VPFSHKTFVV ITTILLFAGY TLAISITSFA LVLAIVGATG STAISFILPG LFGYKLIGSE SDDPSILETV FKNLSLALTI WGFVVMVLCL YTSLFLNQV
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