Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_68475 |
Symbol | |
ID | 4840997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 455343 |
End bp | 457847 |
Gene Length | 2505 bp |
Protein Length | 782 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392312 |
Product | predicted protein |
Protein accession | XP_001386676 |
Protein GI | 150866921 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGAAAAAGAG GATTTCTGTC CCAATCACAT AAACAGCAAG TAATAGCAGT ACCATGGCCT TTTTCAGATA CGCATGGCCT GTGGCTGTTG CGTTGGGCTA CTTGTTCTAT ACTTTAACCT ATGTTTGTCC CATTGCTGAT CCATACATCC ACTCCGCAGG GGAGCTCCAC AGCTTGCTGC CGGTGGTGTA CCATACGTGT ACGTTTAGCA ACAGTTACTT GAAGCCAGTA TTCCATGAAT CGGTGTTGCC TGTCTATACC AATGTAGTTG AACCGCGTCT TGTTGCTGTC GATGAGTCTT TGCACATTTC GCAGGCTGTA GATTCTACCA AACAGTTTGT CTTGGGTCTT GACGAAAACT ACAAAATCAG CACCCATTTT GAAAACGCAT GTGTGACATA CCATCGTAAA GTTCTTGAAC TCACGGACTA CTTGGAACGT AACGTGTATC CTGAGATCTG GCGATATGTA GAAAAAGCCC GCTTCAGGCT CTTGTTCTAC TTCCGTGTCG CCAAATTGAA CGTGTATGTT TACGGCGGAG TAGCCTACGG CAAGTTGGAC GAGTTCGGGG TTAGTTCGGC AGTGAACAAC GCTGTAAATT TTGTAACATC AATTGAATTC GTCCAGAAAC TCATTTTGTG TTATCAGGAC ATCGTAACCA AGTTGTTGGA AAAGAAGAGT TCAATCAACT TACAGCAGAA GGGTCGTTTC CTCCAACAGG AATTTAAGAA CTTGATCAAA TTCAACCAGT TCTATAGCAA CATAAAGCTG AAAGGCGATG TCCAGAAGAA AAACATAGCT GAGATCGTGA AGGATCTCTT GAACAAGGTT TCTGACAAAA CCACTGATGA CGAGGATTAC GACAGCGATG TCTCAGACGA GGAAGAAGAG CCTATTGTGG TACTTTTAAC CTCGACAATT ACCGTAACTG ACGAAAGTGT GCCAACGAGC GATGTCAGCG TAGAAGCAAT TCAAGATCCT ACATTGTTGA GAATCAATGA AGAATTGCAA TTCTGGGAGA CCAAAGTTAA CAAGACATTG CAGTTGGCCC AGAGCAACTT GGAGATAGAA ATGAAGCCCA TTGTCAACAA CTCCATTGAA CTGATTAAGC CGCAAATCAG TATTCTTTTG CTGAACTTGC AGAAGGATTG TTATTCTCAG TACCAGATTC TCAGCAAGAA GATTTCTGAG ATCAATAAGG ACTATGAGAA GATCAAGCAG ACTAACGACT CAACAATTGA AACTGTTTCA AGGCAGGAAA TCAGGGACGA CATCGCTGCT ACTTACAAGT TGCCTGAAGG AGCATCGGAG GCCATTCAAC AACTCCTTGT GGATACCCAT GATCAGGTAT TAGTAGAGTA TTTCAAAGTG GTTCAGGATA CAATCGATAT CTTGGAATCG TTTTCTGAGA CTACTATTCA AGAGTTTTCC AAACAGTTGA CGCTGGTCTT GGACGAGCTT GAATTGGAAG ACGATGAAAT CACTTGGAAA ACTTGGAAGA GATTCCACAG AGTCAAGGAA GATATCTTCA AGTTCAGAGA CTTCATTTTT GACACTGCTA ATGAGTACAA AACTAGCAAC AACAAGGACT TGAAGGCTCT TGGCTTGGAC GGATGGAACG ACTATTTGAA GAATGTAGAG TTCCATATCA ACTATTTAGT TCGTGACAAT GATGACTACT TGAGATTGGT CAGAGCTAAG GCCAACGTTG CTTTCCAATT GAGGGAAGCC ACGGTGAGAA AATTGGAAGA AGAGAATGTG GACGCCGAAG AGAGGTTCGA AGAAACAGTT GAAGAAGTTC AGGAACCCAT TCCTGAAGTT GTGTCCGAAG ACTCTGCCAT TGAAGAGGTG GAAGTGGAAT CTGCTGTTGA GGACGTTGAT CCTATTAACA ATGATGAAGC TGAGATTGTG GAAGAACATT TAGACTCTGA AAAAGAACAA TTTGTGGAAA GCAGTGAAGC TGAAAATTTC GAAACAGAGG AGATAGTTGA AGATGAAAAT TCAGAGACAG AGGAGATAGT TGAAAATGAA AGCTCCGACA CAGAGGCAAT AGTCGAAGAT GAAAGCTCCG ATACGGAGGC AATAGTCGAA GATGAAAGTT CTGGGACTGA GGAAATAGTA GACGACGAGA GCTCTAACAC AGAGGAGATA GTAGACGACG AAAGCTCCGA CACAGAGGAA ATTGTTGATG AAAACTCTGA GACAGAAGAG ACAATCGATG AAAACTCTGA GACAGAAGAA GTGGTCGAAG CCGAAGAGGC TCCTGAAGTT CAGGAAGAAG AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG TAGAAGTGGT TGTGGTGGAG GTGGAAGAGG TTGAAGAGAG CGAAAACGAC GCAGATGTGG ATACTGACAT CGAGCTTGGA GAAGAAGCTT AAGTAATTTG CAACATATTA TCCCCAATTG ACATTGATAG ATTTCGGTTT CGGAGAAAAT CCTGCCAGGT AAATAGTTCT AATCTATAAT AAATAATATA ATAAT
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Protein sequence | MAFFRYAWPV AVALGYLFYT LTYVCPIADP YIHSAGELHS LSPVVYHTCT FSNSYLKPVF HESVLPVYTN VVEPRLVAVD ESLHISQAVD STKQFVLGLD ENYKISTHFE NACVTYHRKV LELTDYLERN VYPEIWRYVE KARFRLLFYF RVAKLNVYVY GGVAYGKLDE FGVSSAVNNA VNFVTSIEFV QKLILCYQDI VTKLLEKKSS INLQQKGRFL QQEFKNLIKF NQFYSNIKSK GDVQKKNIAE IVKDLLNKVS DKTTDDEDYD SDVSDEEEEP IVVLLTSTIT VTDESVPTSD VSVEAIQDPT LLRINEELQF WETKVNKTLQ LAQSNLEIEM KPIVNNSIES IKPQISILLS NLQKDCYSQY QILSKKISEI NKDYEKIKQT NDSTIETVSR QEIRDDIAAT YKLPEGASEA IQQLLVDTHD QVLVEYFKVV QDTIDILESF SETTIQEFSK QLTSVLDELE LEDDEITWKT WKRFHRVKED IFKFRDFIFD TANEYKTSNN KDLKALGLDG WNDYLKNVEF HINYLVRDND DYLRLVRAKA NVAFQLREAT VRKLEEENVD AEERFEETVE EVQEPIPEVV SEDSAIEEVE VESAVEDVDP INNDEAEIVE EHLDSEKEQF VESSEAENFE TEEIVEDENS ETEEIVENES SDTEAIVEDE SSDTEAIVED ESSGTEEIVD DESSNTEEIV DDESSDTEEI VDENSETEET IDENSETEEV VEAEEAPEVQ EEEEEEEEEE EEVEVVVVEV EEVEESENDA DVDTDIELGE EA
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