Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67778 |
Symbol | ADR1.2 |
ID | 4839630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 323588 |
End bp | 327318 |
Gene Length | 3731 bp |
Protein Length | 1049 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390945 |
Product | ADR1-like Zn finger domain protein |
Protein accession | XP_001385081 |
Protein GI | 150865744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.119069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TAGACGCTCC AAGTTAATTT GTCAATTCTG AATAGTCCGA ATCTCTACCA CCGTCACACA TACACCTTCC TGTTAACTCG TCGAACTGCC CAATCTGGAA TTGATCAGCG CATCGCAAGG CAGAGCACAC CGGCATTAGC ATTCAAAATA AAGTATATAC TTAGTCCGTG AAAGAAGTTA ACGAAGAACC ACATATTTTG GAAAGAACAC CAGCGCAAAC AGGTTCTTAT AACTACGCTG AATATTCCTT TTTAGCAATT GTACCACCAT TGTAGTTGGT TGAATTTTTC GTGAAGATTC TTCAAATTTT CGAACCAGAA CAACCGTAAA ATTACATAAC ATCCACAGAT CCACCTTGCT CGGACATCAT ACTTCAGCAC CACGTCAAGC AACACAGCTG ACTTGAAATC ACATATTATA CATATACATC TACAAACCTC ACCTCATCAG AGGCATCATA CCTATTACTC ATCTATCATC GTACTAGTAT CATAACCTAT CGGTGCCATG ACCACACAGA AGAAATACAT TTGTGCCTTT TGCGCCAGAG CGTTTACTCG GTCTGAACAT AAGCAGAGGC ACGAGCGCTC TCACACAAAC GAGAAGCCAT TCCATTGTAT GCATTGTACG TCGTCATTTG TAAGAAGAGA CTTGCTTCAA CGACACTGTC GTACTGTTCA TAACAGCCAG ATGGCAAGTG CCGCAAATGG TGCCCAGCCC AAAACAGAAG CTGCTAGCTC TGGTCCTGCC CCTGCTCCCC CATTGGCCCC AGCACCAGCG CAAATCCAAG TAGCACAGGC GGCTGCATCA GCACATTCGG GACCCAACCA GGTCCAGACT TTCCAGCATA ACCAGGGCCA GAACCAGGTA CATGACCAGA GTCAGATGAT CCAGAATCAA AATCAAAATC AAAATCAAAT TCAGAATCCA AATTACCTTC ACAATAACCA GGATTCTACG CCTATGTTAA ATTCTTCCAG TATAGCATTG ACTATTTTCA ATGGTTTAGG TTCTACAGCT TCTAATTCTT CTGAAGACAA CATCAACGAT ATCGAGCCTC TTTCTATTGA CAACAGAAAT GATCTCTCGC CCACTCTGCA TAACAGTCAC CATCATAATT CAGGTCTTGT ACCGAACGCA AAGAGAAGAA AGAAGACTCA CGAAAAGAAC GTGGACGATA TTGTCACATT GTCCACAGCC AATGGCATAG TTAGTAACGG CAATGGTAAC TCAGCTAAAG ATGGGTTGAA TCACGACTTG ATTCATTTGC TTTCAATAGC CAAAAAGTTG GAGTCGCTTT TGATTAGCTA CGACATTTCC AACGAAAGTA ACTCGTTGAA CGACCATTTT TTGATCGGCT ACATAAACTT GCAACAAGCA CTGGGAAACT ACCCCATCTT TGACAAGATG CTTAAGGACT TGATCTACTA CTTGAACTCG TACAACTCTA ACAAATCCAA TTCCCCTACA TTGAGACAGC TGAGTCTGGG AATACATTCG CCCATTCCTG GCTCCCAACC CAACAACTTC AAGATTGGCA TCATCTACTC CGTCATTTCC ATGGGATACA TTACAAACAA CAATTACAAC AAGTCGTTCA AGTACTTCAA GATGGCGTGG TACTTATTGA TCAAGAAGCT CATCCCCAAC TACAACAACA ATAACAATTT ACTCGACCAG ATCGAGATCT TGAACAACTT GTATTTGTTG TCGTATATAT ACCTCAACTA CAATCTCGAA GCATTCAGTG CTAGCACAGA TGATGAAGAA GACAGTGCCT TTGTCAATAA TGAAATCATC CTTAACTATT TGAACGACAT TAGTTATATC ATCATATCCA ACTTGAAGGA CTTGAACAAC TCCAACGAGA ACTTGATAGA TTTGAACATC AATCTCTTCT GGAACATCTA CATCTTGCTC TCACAATACT TACAGGGCCA ACCTCCGAAG TTTTACTCGT TTTTCCTAAA CAAGTCTGTC AAGGGCAAAG AGACATTGCG CACTTTAATG CTAAAGTTCT CCAAGTCATT GGTAGAGTTA GACTACGACG AGGACTTCTT GAAGATGATC ATCATTAGCA CGTTATCCAA CGAGTTGAAG AAGTTTGTCA AGGGCGACAA CTTCTTGATC TTCAACAACA AGAACTGTTT ACACAACTCT ATCATTCTCA TCAACAAGTC AATCAACATC CACAACACAA GCAGACAGTT GCATAATGTG GACTTCTCGT TGATGAAACT CTTTGAGTTG TTCAAAAAGA GCGTGATTAT TAGCAGCCCT TTGAAGTTCC ACGAGCTTTT GAGCAACTAC ATCTTCATCC CACAACTGTA CTACAACTGG GAATTATTGA ACTTGACCTT GCAGGAGATC AACTTGAACT ATCCCATTAA CCAAACGTTA CAGGATTTCT TCGTGAATCC TGCCGCGTCC AACTTGGAAA TCAGGCTCAA GAACTTCTTC AACTACAAAC AGAACTCCAT CGATATCAAC AACAACTTGA GCATCATCAG TTTCCCTATT GTGTTTTTCA CGAACTACTT GAACCTCGGT TTGATCAACA TCAAGGAGTT CAACTTCTTA CAATTGAATA ACCTCAATTT GTTTTTGGTA GAATGGTACT TGATTATGAA CAAGATCTTG TTAATGATCT GGAGCAACAA CGACTTGTTC AATGAGAACT ACATATTGCA AAATCTCATC TTTTTGTTGA TGGACAACAA GAGCTGCTTA AGCAACACCT TAAACTTGGA CATGCCTTCA CCAACAAACA CCTCTCCACG TATGTCTTCT GCATCATTGG TGTCAAACTC TAATTCCAAC TCCAACATGG CATTATCTGC TGCTGCAGCC ATTGTAAACA GCGAAATCAG TTACCACGAA AACTTTGCGT TCAATAATAA GTGGTTTTGG ATTGTCAAGA TGAAGTTTGA CACCATCTTC GAGTCATGGT TAGATTTCAT CAGAGAAACC AGCAACAGAA AATACGCACC CACCAGCAAC ACAACAAGCA CCAACTTGGC TCTTTTGAGA GTCACCTTGG ACAAATTCAT CAACGACTTG GACCAGTCTG AATTGGCTAA ATCCACCAAG GAAGACAAGA TCATTTTGAG CCACGAAGTG TTCTACCCTC CACCAGCTGC CAATGCGAGT ATTACCCCAA CCACAGCCAA TGCACCCAAC CCAATGGTAA CATACAACTA TCCAGAATAC AACACAAGCA ATTATAGAAG ATCCAACTCC ATAACATTGG GGATATTGGG CAATTCACAC ACCCGTGGTG AGGGCCAGTA CCAATCACAA TCACCTATCA TTGCTAATTC TTCAGCTACG AATGGTGTTG TTCCCTCTAA TAATAATCCT AAATTCAAAG TGGCTATTAA CGGAAACAAC AAGATGAACC ATTACTCTTC ATATTCAACG TACCCACCAC TACCTCCTAT CTTGGCAACC CCAGGCATGA GTATGAATGG AAATGGTACC AATGCTTCTC CCAGCAACCC CAAACCAAAT GCTAGTGATA TGCTCTTGTT GCCTCCTATC TTGCCGAAAA GTGGAAGCTT TTCCAACAAG ATCTCAGAAG ACGAACAGGC AAATACTCAG TCCAACGATA GCAAGAGTAT GCAAACTTTG GTGAGCAACA TTGTTCACAA GGACTAGAGA GTAGAAGTAT ATTATTAACA TACCCATATG ACCTATGTAA TTATATAAAG TAATTTACAC CTTAATGTTA T
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Protein sequence | MTTQKKYICA FCARAFTRSE HKQRHERSHT NEKPFHCMHC TSSFVRRDLL QRHCRTVHNS QMASAANGAQ PKTEAASSGP APAPPLAPAP AQIQVAQAAA SAHSGPNQVQ TFQHNQGQNQ VHDQSQMIQN QNQNQNQIQN PNYLHNNQDS TPMLNSSSIA LTIFNGLGST ASNSSEDNIN DIEPLSIDNR NDLSPTSHNS HHHNSGLVPN AKRRKKTHEK NVDDIVTLST ANGIVSNGNG NSAKDGLNHD LIHLLSIAKK LESLLISYDI SNESNSLNDH FLIGYINLQQ ASGNYPIFDK MLKDLIYYLN SYNSNKSNSP TLRQSSSGIH SPIPGSQPNN FKIGIIYSVI SMGYITNNNY NKSFKYFKMA WYLLIKKLIP NYNNNNNLLD QIEILNNLYL LSYIYLNYNL EAFSASTDDE EDSAFVNNEI ILNYLNDISY IIISNLKDLN NSNENLIDLN INLFWNIYIL LSQYLQGQPP KFYSFFLNKS VKGKETLRTL MLKFSKSLVE LDYDEDFLKM IIISTLSNEL KKFVKGDNFL IFNNKNCLHN SIILINKSIN IHNTSRQLHN VDFSLMKLFE LFKKSVIISS PLKFHELLSN YIFIPQSYYN WELLNLTLQE INLNYPINQT LQDFFVNPAA SNLEIRLKNF FNYKQNSIDI NNNLSIISFP IVFFTNYLNL GLINIKEFNF LQLNNLNLFL VEWYLIMNKI LLMIWSNNDL FNENYILQNL IFLLMDNKSC LSNTLNLDMP SPTNTSPRMS SASLVSNSNS NSNMALSAAA AIVNSEISYH ENFAFNNKWF WIVKMKFDTI FESWLDFIRE TSNRKYAPTS NTTSTNLALL RVTLDKFIND LDQSELAKST KEDKIILSHE VFYPPPAANA SITPTTANAP NPMVTYNYPE YNTSNYRRSN SITLGILGNS HTRGEGQYQS QSPIIANSSA TNGVVPSNNN PKFKVAINGN NKMNHYSSYS TYPPLPPILA TPGMSMNGNG TNASPSNPKP NASDMLLLPP ILPKSGSFSN KISEDEQANT QSNDSKSMQT LVSNIVHKD
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