Gene PICST_67778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67778 
SymbolADR1.2 
ID4839630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp323588 
End bp327318 
Gene Length3731 bp 
Protein Length1049 aa 
Translation table12 
GC content41% 
IMG OID640390945 
ProductADR1-like Zn finger domain protein 
Protein accessionXP_001385081 
Protein GI150865744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TAGACGCTCC AAGTTAATTT GTCAATTCTG AATAGTCCGA ATCTCTACCA CCGTCACACA 
TACACCTTCC TGTTAACTCG TCGAACTGCC CAATCTGGAA TTGATCAGCG CATCGCAAGG
CAGAGCACAC CGGCATTAGC ATTCAAAATA AAGTATATAC TTAGTCCGTG AAAGAAGTTA
ACGAAGAACC ACATATTTTG GAAAGAACAC CAGCGCAAAC AGGTTCTTAT AACTACGCTG
AATATTCCTT TTTAGCAATT GTACCACCAT TGTAGTTGGT TGAATTTTTC GTGAAGATTC
TTCAAATTTT CGAACCAGAA CAACCGTAAA ATTACATAAC ATCCACAGAT CCACCTTGCT
CGGACATCAT ACTTCAGCAC CACGTCAAGC AACACAGCTG ACTTGAAATC ACATATTATA
CATATACATC TACAAACCTC ACCTCATCAG AGGCATCATA CCTATTACTC ATCTATCATC
GTACTAGTAT CATAACCTAT CGGTGCCATG ACCACACAGA AGAAATACAT TTGTGCCTTT
TGCGCCAGAG CGTTTACTCG GTCTGAACAT AAGCAGAGGC ACGAGCGCTC TCACACAAAC
GAGAAGCCAT TCCATTGTAT GCATTGTACG TCGTCATTTG TAAGAAGAGA CTTGCTTCAA
CGACACTGTC GTACTGTTCA TAACAGCCAG ATGGCAAGTG CCGCAAATGG TGCCCAGCCC
AAAACAGAAG CTGCTAGCTC TGGTCCTGCC CCTGCTCCCC CATTGGCCCC AGCACCAGCG
CAAATCCAAG TAGCACAGGC GGCTGCATCA GCACATTCGG GACCCAACCA GGTCCAGACT
TTCCAGCATA ACCAGGGCCA GAACCAGGTA CATGACCAGA GTCAGATGAT CCAGAATCAA
AATCAAAATC AAAATCAAAT TCAGAATCCA AATTACCTTC ACAATAACCA GGATTCTACG
CCTATGTTAA ATTCTTCCAG TATAGCATTG ACTATTTTCA ATGGTTTAGG TTCTACAGCT
TCTAATTCTT CTGAAGACAA CATCAACGAT ATCGAGCCTC TTTCTATTGA CAACAGAAAT
GATCTCTCGC CCACTCTGCA TAACAGTCAC CATCATAATT CAGGTCTTGT ACCGAACGCA
AAGAGAAGAA AGAAGACTCA CGAAAAGAAC GTGGACGATA TTGTCACATT GTCCACAGCC
AATGGCATAG TTAGTAACGG CAATGGTAAC TCAGCTAAAG ATGGGTTGAA TCACGACTTG
ATTCATTTGC TTTCAATAGC CAAAAAGTTG GAGTCGCTTT TGATTAGCTA CGACATTTCC
AACGAAAGTA ACTCGTTGAA CGACCATTTT TTGATCGGCT ACATAAACTT GCAACAAGCA
CTGGGAAACT ACCCCATCTT TGACAAGATG CTTAAGGACT TGATCTACTA CTTGAACTCG
TACAACTCTA ACAAATCCAA TTCCCCTACA TTGAGACAGC TGAGTCTGGG AATACATTCG
CCCATTCCTG GCTCCCAACC CAACAACTTC AAGATTGGCA TCATCTACTC CGTCATTTCC
ATGGGATACA TTACAAACAA CAATTACAAC AAGTCGTTCA AGTACTTCAA GATGGCGTGG
TACTTATTGA TCAAGAAGCT CATCCCCAAC TACAACAACA ATAACAATTT ACTCGACCAG
ATCGAGATCT TGAACAACTT GTATTTGTTG TCGTATATAT ACCTCAACTA CAATCTCGAA
GCATTCAGTG CTAGCACAGA TGATGAAGAA GACAGTGCCT TTGTCAATAA TGAAATCATC
CTTAACTATT TGAACGACAT TAGTTATATC ATCATATCCA ACTTGAAGGA CTTGAACAAC
TCCAACGAGA ACTTGATAGA TTTGAACATC AATCTCTTCT GGAACATCTA CATCTTGCTC
TCACAATACT TACAGGGCCA ACCTCCGAAG TTTTACTCGT TTTTCCTAAA CAAGTCTGTC
AAGGGCAAAG AGACATTGCG CACTTTAATG CTAAAGTTCT CCAAGTCATT GGTAGAGTTA
GACTACGACG AGGACTTCTT GAAGATGATC ATCATTAGCA CGTTATCCAA CGAGTTGAAG
AAGTTTGTCA AGGGCGACAA CTTCTTGATC TTCAACAACA AGAACTGTTT ACACAACTCT
ATCATTCTCA TCAACAAGTC AATCAACATC CACAACACAA GCAGACAGTT GCATAATGTG
GACTTCTCGT TGATGAAACT CTTTGAGTTG TTCAAAAAGA GCGTGATTAT TAGCAGCCCT
TTGAAGTTCC ACGAGCTTTT GAGCAACTAC ATCTTCATCC CACAACTGTA CTACAACTGG
GAATTATTGA ACTTGACCTT GCAGGAGATC AACTTGAACT ATCCCATTAA CCAAACGTTA
CAGGATTTCT TCGTGAATCC TGCCGCGTCC AACTTGGAAA TCAGGCTCAA GAACTTCTTC
AACTACAAAC AGAACTCCAT CGATATCAAC AACAACTTGA GCATCATCAG TTTCCCTATT
GTGTTTTTCA CGAACTACTT GAACCTCGGT TTGATCAACA TCAAGGAGTT CAACTTCTTA
CAATTGAATA ACCTCAATTT GTTTTTGGTA GAATGGTACT TGATTATGAA CAAGATCTTG
TTAATGATCT GGAGCAACAA CGACTTGTTC AATGAGAACT ACATATTGCA AAATCTCATC
TTTTTGTTGA TGGACAACAA GAGCTGCTTA AGCAACACCT TAAACTTGGA CATGCCTTCA
CCAACAAACA CCTCTCCACG TATGTCTTCT GCATCATTGG TGTCAAACTC TAATTCCAAC
TCCAACATGG CATTATCTGC TGCTGCAGCC ATTGTAAACA GCGAAATCAG TTACCACGAA
AACTTTGCGT TCAATAATAA GTGGTTTTGG ATTGTCAAGA TGAAGTTTGA CACCATCTTC
GAGTCATGGT TAGATTTCAT CAGAGAAACC AGCAACAGAA AATACGCACC CACCAGCAAC
ACAACAAGCA CCAACTTGGC TCTTTTGAGA GTCACCTTGG ACAAATTCAT CAACGACTTG
GACCAGTCTG AATTGGCTAA ATCCACCAAG GAAGACAAGA TCATTTTGAG CCACGAAGTG
TTCTACCCTC CACCAGCTGC CAATGCGAGT ATTACCCCAA CCACAGCCAA TGCACCCAAC
CCAATGGTAA CATACAACTA TCCAGAATAC AACACAAGCA ATTATAGAAG ATCCAACTCC
ATAACATTGG GGATATTGGG CAATTCACAC ACCCGTGGTG AGGGCCAGTA CCAATCACAA
TCACCTATCA TTGCTAATTC TTCAGCTACG AATGGTGTTG TTCCCTCTAA TAATAATCCT
AAATTCAAAG TGGCTATTAA CGGAAACAAC AAGATGAACC ATTACTCTTC ATATTCAACG
TACCCACCAC TACCTCCTAT CTTGGCAACC CCAGGCATGA GTATGAATGG AAATGGTACC
AATGCTTCTC CCAGCAACCC CAAACCAAAT GCTAGTGATA TGCTCTTGTT GCCTCCTATC
TTGCCGAAAA GTGGAAGCTT TTCCAACAAG ATCTCAGAAG ACGAACAGGC AAATACTCAG
TCCAACGATA GCAAGAGTAT GCAAACTTTG GTGAGCAACA TTGTTCACAA GGACTAGAGA
GTAGAAGTAT ATTATTAACA TACCCATATG ACCTATGTAA TTATATAAAG TAATTTACAC
CTTAATGTTA T
 
Protein sequence
MTTQKKYICA FCARAFTRSE HKQRHERSHT NEKPFHCMHC TSSFVRRDLL QRHCRTVHNS 
QMASAANGAQ PKTEAASSGP APAPPLAPAP AQIQVAQAAA SAHSGPNQVQ TFQHNQGQNQ
VHDQSQMIQN QNQNQNQIQN PNYLHNNQDS TPMLNSSSIA LTIFNGLGST ASNSSEDNIN
DIEPLSIDNR NDLSPTSHNS HHHNSGLVPN AKRRKKTHEK NVDDIVTLST ANGIVSNGNG
NSAKDGLNHD LIHLLSIAKK LESLLISYDI SNESNSLNDH FLIGYINLQQ ASGNYPIFDK
MLKDLIYYLN SYNSNKSNSP TLRQSSSGIH SPIPGSQPNN FKIGIIYSVI SMGYITNNNY
NKSFKYFKMA WYLLIKKLIP NYNNNNNLLD QIEILNNLYL LSYIYLNYNL EAFSASTDDE
EDSAFVNNEI ILNYLNDISY IIISNLKDLN NSNENLIDLN INLFWNIYIL LSQYLQGQPP
KFYSFFLNKS VKGKETLRTL MLKFSKSLVE LDYDEDFLKM IIISTLSNEL KKFVKGDNFL
IFNNKNCLHN SIILINKSIN IHNTSRQLHN VDFSLMKLFE LFKKSVIISS PLKFHELLSN
YIFIPQSYYN WELLNLTLQE INLNYPINQT LQDFFVNPAA SNLEIRLKNF FNYKQNSIDI
NNNLSIISFP IVFFTNYLNL GLINIKEFNF LQLNNLNLFL VEWYLIMNKI LLMIWSNNDL
FNENYILQNL IFLLMDNKSC LSNTLNLDMP SPTNTSPRMS SASLVSNSNS NSNMALSAAA
AIVNSEISYH ENFAFNNKWF WIVKMKFDTI FESWLDFIRE TSNRKYAPTS NTTSTNLALL
RVTLDKFIND LDQSELAKST KEDKIILSHE VFYPPPAANA SITPTTANAP NPMVTYNYPE
YNTSNYRRSN SITLGILGNS HTRGEGQYQS QSPIIANSSA TNGVVPSNNN PKFKVAINGN
NKMNHYSSYS TYPPLPPILA TPGMSMNGNG TNASPSNPKP NASDMLLLPP ILPKSGSFSN
KISEDEQANT QSNDSKSMQT LVSNIVHKD