Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67560 |
Symbol | DNF3 |
ID | 4838464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 779199 |
End bp | 784590 |
Gene Length | 5392 bp |
Protein Length | 1776 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389779 |
Product | aminophospholipid-translocating ATPase |
Protein accession | XP_001384106 |
Protein GI | 150865053 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01652] phospholipid-translocating P-type ATPase, flippase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.547535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTT GTGCGTGGTT TTTTTTTCAG CCAGATACTT TCGGACCAGA TTCTTCTTTG ATAAATCATA AGAAATCTCT CCACAACTTT TCTCAAAGAC TCTTCATTCG AATATTAGTG ACTGAGAAGA TTACACAACT ACTACGGATG AGTCTACCGC CAGAAACACC GCAGGAACAG CCTTCCAGCA CTCTGCAAAC GCGACGCAAG AGGGGACTTT CACTCCGATC CCAGCTCTTT TCTAAAGCGA TCTCTGGCCA GAACCAGCCA CTGCAACTGC TGGAACATTC CAGAAACCCT TTCAGAGTAA AATTCGATAT AACTGAACCT TCAGATTCTA ATGAAAATGC TGATGGCCAA GCGAATCTGG CAAATGGCAG CTATCTTCGT ACAGATAACC CATCTCTTGG AACAAATGAC AACACCAGTT ATCAGATAGA ATTGAACACA CTACATCCGG ATACAGCCTC AATTCCTCAG ATAAACATCA ATGCACCTTC CCCTGATTCT CGTTCTGAAG ATGCAAATTT GCACGTTCCC TACGGGCATT TGAACGACTC AACTCTCATA AGATCTACCA CTCATCTAAC AGTCGATTCC AACAGATCTG ATGCCAGCTC GCTGTCCTTC TTAGCCAAAC GTAAAAGAAC CTCTCAACGT CGCTATGGTA CGAAAAACAG ATTGGTCAAA AACTTGATAA GGCTCAAGGA CAACATCTTG GGCAACAAGA CACTTCCAAG TACTGAGAGG GGCCGAGTGA TTCCAATCAC CACAAACTTC AACGAGATCA ATTCCTACTT TCAGGATCAG TACTACAACG AACATACCAA GTGTCTCATC GACGAACGTA GTGACGAGCC GTATGAGAAG AACATAGTGA CTTCTTCTAA GTATACTGTC TATTCGTTTT TACCTAAACA GTTGAGAGCC CAGTTCTCCA AAATCGCCAA TTGCTATTTC ATGGTCGTAG CAATCATGCA AATGATCCCC ACATGGTCTA CAACAGGTCA GTACACTACT ATCATCCCGT TGATGATCTT CATGTCAATT TCGATAGCTA GAGAAGGATT TGACGACTGG AAAAGACATG GCCACGACAA AGAAGAAAAC AACAAAAAGA CAAAAGTCAT CAAAGAAGAC GAAAACTTGA GCAACTTCGA TACCCACTCA ATTACAACCA TATTGACAGA AACAATTTCA GTCAGTAATA ACAACATCCT TTCTCCTCAT GGATCACGAG CAGCGAGCCC ATCTAATAAC GTCTCTTCCA ATTCATCATT ATCAGATCCA GAGCCACAAA ATGAGACAAA CACAAACTAC ACGAATTTGG AGCTTATGAA ACAGTACAAT CTCAAGGAGT ACGCCACGAA GTGGAAACAC ATAAAAGTAG GAGACATCAT AAAAGTCTCT GAAAATGAAG CCTTCCCAGC AGATGTCATG TTATTAGCTA CGAGTGACAC AGATAACCAA GAAGCATTTA TAGAAACCAT GGATTTAGAT GGAGAAACGA ACTTAAAGCT GAAGTGTCCA CATGCTGAGA TCTGTAAGAA GTTCTCTAAT GTGACTGGGT TGAAAAACAC AAAGATGTTG ATAACCGTAG AAGACCCCAA CATCGATTTG TACAACTTTG AAGGTTCGTT TGAGGTAAAC GACAAAGTGT TTGCTTTGGG GCCAGATAAT GTCGTTTATA GAGGTAGCGT TCTTCGAAAC ACAAAGTCGG TTTTAGGATT GGTCATTTTC ACAGGTGAAG AGACAAAAAT CAGAATGAAC AATATTAAGA ATCCCAGAAC TAAGGCTCCA AAATTGCAGA GAAACATCAA CTACATTGTG ATATTTATGG TGTTTGTAGT GATTTCGTTG TCGGCGTTTT CCACCATGGT GCAACGTCTT CTATACGAGA GAAATAGAGA CAAGGCATGG TATCTCTTTG ATCTGGATGC TGGTGTTGCA TCTACTCTTA TGGGTTTCAT CATCATGTAT AATACATTGA TTCCATTATC GCTTTATGTC ACTATGGAAA TCATCAAGGT GATGCAATTG CTATTTCTAC AGTATGATAT AGACATGTAC CACGTAGAGA GCAACACACC CGCAGATGCG AAGACAGCAA CCATCTTGGA AGAACTTGGT CAAGTCAGCT ACATATTCAG TGACAAGACA GGAACTTTGA CTGATAACCA GATGATTTTC AGGAAGTTCA GTGTCTGTGG AGCAAGCTGG TTACATGACT TGGACTTGAT GTTGAACGAA AAGGAAGACC CTAACAAAGT CGCTCCTTTA GTACCAATGC CACGAACCAG CATGCATCAC CTGCCACGCC AGTCTGGTCG CAAGGTAGGC CCAGATTATC AGCCAAGAAC AAGTACTACT TCTATTGCTA GAGAAAGTTT GGAATTATCC TTGGTCAGAT CGAATGTTAC CTGGAAGTCT TCTGCTCAAC CAAACAAGAC GCAGGACATG TCCAGTTCTT TGAAATTGAT AAAATACATA CAATCGCATC CACATACTAT CTTCTCCAGA AAGGCTAAGA TGTTTCTTTT GAGTATTGCC TTGTGCAATA CTTGTCTTCC TAGAAAAGAC AATACTTCGA AAAACTCGTC AGTGCTTACT CTTGATGACA TTGACGGGGT ACAGCAGCAG GAGTTAAGAG CAAAGCGAAA TGTGGAAGAC TCTTCTATCT CTTATCAAGC TGCTTCTCCA GACGAATTGG CACTTGTTCA AGCATCCAAG GATCTAGGAT TTGTGGTTCT AGATAGGCAG AACAATGTGT TGACAATTAA GACTTATCCA GAGGGATTTC AGAAAGAACC CAAATTCGAG GAGTATCAAG TTCTCGAAGT TATAGAGTTC TCATCTAGTA GAAAAAGAAT GTCTACTGTA GTTAGGTTTC CAGACGGAAG AATTTGTCTT ATTTGTAAAG GTGCCGACAA TGTCATTTTG GAGAAGTTGA AGTATGCCGA TATGGCAAAA GAGAAAGCAA AAGAAATCTC ACTCAACACG ACAGAAAGAA AAACACAACA GGCTGATATA GTTTTGCTGA ACAGATTTTC CTCAGAACTA GAATCGAGAA AATCAATTGG CTCCATTGGT CAACGTTTGA GTTTGAGTGG CGGCGATAGA ATTACTTCCA CTATTGACAA CACGCTTCTG AATGCTGAAG ATGAGATGGC TGATATTGCC TTAAAGGCAA GAAAGTCATT GCATGTCCAT CAAGCAAAGA AGTATAGCAT GGATCAGGCC TCGTTTACTA ATGTAGATCC ACCGTCTCCA GTACTTAACC TGTCCGGGAC TCTGGGAAGC AATAGCCAGA TCCCCAACGA CAGGCTACTT CTCAATGATG AATACCTTGT CGAAAAGACA TTGGAGCATA TTGAAGAATT TTCCACTGAA GGGCTCAGAA CATTGATGTA CTCGTACAGG TGGTTGGATA AAAATGAGTA TGAGGCATGG TCCCAAGAGT ATAGCCTTGC TAGGACTGCT TTAAAGGATA GAGCCAGAAA GGTAGAGGAA GTAGGAGCTA AAATCGAACA CAAGTTTGAG CTTCTTGGTG CAACTGCTAT TGAAGATAAA TTGCAAGAAG GAGTCAGTGA TACTATAGAC AAGTTAAGAA GGGCAGGAAT CAAGATGTGG ATGTTGACAG GAGACAAACG TGAAACTGCT ATTAATATTG GTTACTCGTG TAGACTCATT AAGGACTACT CCACTGTTGT TATTCTTTCG CATGATGAAG GAATCGATAC GATTATGGAT CGTATCACTT CTGCCAGTCA GGAGATACAA GCAGGAAGAG TAGCCCATTG TGTTTTGGTA ATTGATGGTG GAACTTTAGC TGAAATTGAA AATGATTCCG CTTTGCTCAC TTTGTTCCTT GATCTATGCA TCCAGGTAGA TTCTACAATC TGCTGTCGTG CTTCGCCTTC ACAAAAGGCT AATATGGTTA GTGCTGTGCG AAAATTGAAC AACAGGGCTG TGACTTTGGC AATTGGAGAT GGTGCAAACG ATATTGCCAT GATCCAGAGT GCTGACATCG GTATTGGTAT CACTGGTAAG GAAGGGCTAC AAGCTGCTCG TTCTGCCGAT TACGCCATTG CCCAGTTCCG GTTCTTGCTT AAGTTGTTAT TAGTCAATGG TCGTTACAAC TACATACGAA CATCCAAGTT TGTCTTGTGC ACTTTCTACA AAGAATTATT GTTTTATTTG ACGCAGTGTG TCTATCAGAG AAACACTTTA TTCTCAGGCT CTTCGATGTA TGAAAGTTGG TCGTTGTCGA TGTTCAATAC GTTGTTCACT TCTCTCCCCG TCATCTGTAT TGGTATGTTC GACAAAGACT TGAGGCCCTC AACGTTGATA GCAGTACCTG AATTGTATGC AAAGGGAAGA TTGTATCAAG CTTTCAATTT GAAGATCTTT GTGTCATGGA TGTTCTTGGC TGCCATTCAA AGTGTCGGTA TATCTTTCAT GGCTTACTAT GTATGGGGAT TTACCGCTTT ACGTGACAAT ACAACTTTCC CATTGGGTTC TTTGGTGTTT GCTGCTCTTG TTGTAATCAT CAATGCGAAG TGTGAGTTCA TTGAAATGCA GAATAGACAA TGGCTAGCCT TCGCTGCATT CTTTATTTCT GTTGGTGGAT ACGCCTTGTG GAACTGGCTA ATTATGATGT TGTACAGAAC AAAGGATTCG CCAATTTACT TTGTAGCCTA CGGTTTACTA ACATGGGGCC GTGATCAGAG TTGGTGGGCT ACTCTTCTTG CACTCATCAC AGTTCCTCTA TTTGCTGATA TACTTTTCAA AGTGTTTAAA TTCATGTTTA AGCCAGCAGA TGATGAACTT TTCAGGTTGT TTGAAAAAGA TATCGACATG AGAAGGTTCT TTGAACAACA CTCATATAAA GAATTGTATC AGGGATGGAC CTTTTCTAAA CAACCGTCCA CACTTTTTGC AAAGTTAAAA AACGTTGCTA AAGGAGTATT GGGAAAGCCA GCTATCCAAC AAGAACTTGA GGCATTCGAC AATGGTTCAG AACACCAGTC GGCTTACAAT AGAAAGAGGG CAGGAACAAA TCCATTACCT TCTGAACTAC CACCTGGCGG TGAAGGAATT GCTATTGTCG GTAATGACTT CGAACAACCT GGACGTGTTG AGGATGGGTA TGAGATCCTC CCTAGCGGAA AGAGAGTCAA GATTGTAGCA AAGGGGGTCA GTTGGGGAAG TCGTTTCAGA CGCAATGGTT CTTCTGCAGA GAACGAGGAT GTGGATGCTA TTATAGATTC AAGATTGAAC GATCTTAGAA AAGAAGAGGA AGGTCAAGTT GGAGATCGAT CACCAAAATA AGTTTACTAA AAAGTTACTC GTCATTTTCA ATTCTTCAAA AGTCCGTATT TACTACTATT TC
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Protein sequence | MAICAWFFFQ PDTFGPDSSL INHKKSLHNF SQRLFIRILV TEKITQLLRM SLPPETPQEQ PSSTSQTRRK RGLSLRSQLF SKAISGQNQP SQSSEHSRNP FRVKFDITEP SDSNENADGQ ANSANGSYLR TDNPSLGTND NTSYQIELNT LHPDTASIPQ ININAPSPDS RSEDANLHVP YGHLNDSTLI RSTTHLTVDS NRSDASSSSF LAKRKRTSQR RYGTKNRLVK NLIRLKDNIL GNKTLPSTER GRVIPITTNF NEINSYFQDQ YYNEHTKCLI DERSDEPYEK NIVTSSKYTV YSFLPKQLRA QFSKIANCYF MVVAIMQMIP TWSTTGQYTT IIPLMIFMSI SIAREGFDDW KRHGHDKEEN NKKTKVIKED ENLSNFDTHS ITTILTETIS VSNNNILSPH GSRAASPSNN VSSNSSLSDP EPQNETNTNY TNLELMKQYN LKEYATKWKH IKVGDIIKVS ENEAFPADVM LLATSDTDNQ EAFIETMDLD GETNLKSKCP HAEICKKFSN VTGLKNTKML ITVEDPNIDL YNFEGSFEVN DKVFALGPDN VVYRGSVLRN TKSVLGLVIF TGEETKIRMN NIKNPRTKAP KLQRNINYIV IFMVFVVISL SAFSTMVQRL LYERNRDKAW YLFDSDAGVA STLMGFIIMY NTLIPLSLYV TMEIIKVMQL LFLQYDIDMY HVESNTPADA KTATILEELG QVSYIFSDKT GTLTDNQMIF RKFSVCGASW LHDLDLMLNE KEDPNKVAPL VPMPRTSMHH SPRQSGRKVG PDYQPRTSTT SIARESLELS LVRSNVTWKS SAQPNKTQDM SSSLKLIKYI QSHPHTIFSR KAKMFLLSIA LCNTCLPRKD NTSKNSSVLT LDDIDGVQQQ ELRAKRNVED SSISYQAASP DELALVQASK DLGFVVLDRQ NNVLTIKTYP EGFQKEPKFE EYQVLEVIEF SSSRKRMSTV VRFPDGRICL ICKGADNVIL EKLKYADMAK EKAKEISLNT TERKTQQADI VLSNRFSSEL ESRKSIGSIG QRLSLSGGDR ITSTIDNTLS NAEDEMADIA LKARKSLHVH QAKKYSMDQA SFTNVDPPSP VLNSSGTSGS NSQIPNDRLL LNDEYLVEKT LEHIEEFSTE GLRTLMYSYR WLDKNEYEAW SQEYSLARTA LKDRARKVEE VGAKIEHKFE LLGATAIEDK LQEGVSDTID KLRRAGIKMW MLTGDKRETA INIGYSCRLI KDYSTVVILS HDEGIDTIMD RITSASQEIQ AGRVAHCVLV IDGGTLAEIE NDSALLTLFL DLCIQVDSTI CCRASPSQKA NMVSAVRKLN NRAVTLAIGD GANDIAMIQS ADIGIGITGK EGLQAARSAD YAIAQFRFLL KLLLVNGRYN YIRTSKFVLC TFYKELLFYL TQCVYQRNTL FSGSSMYESW SLSMFNTLFT SLPVICIGMF DKDLRPSTLI AVPELYAKGR LYQAFNLKIF VSWMFLAAIQ SVGISFMAYY VWGFTALRDN TTFPLGSLVF AALVVIINAK CEFIEMQNRQ WLAFAAFFIS VGGYALWNWL IMMLYRTKDS PIYFVAYGLL TWGRDQSWWA TLLALITVPL FADILFKVFK FMFKPADDEL FRLFEKDIDM RRFFEQHSYK ELYQGWTFSK QPSTLFAKLK NVAKGVLGKP AIQQELEAFD NGSEHQSAYN RKRAGTNPLP SELPPGGEGI AIVGNDFEQP GRVEDGYEIL PSGKRVKIVA KGVSWGSRFR RNGSSAENED VDAIIDSRLN DLRKEEEGQV GDRSPK
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