Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67545 |
Symbol | |
ID | 4838742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 677897 |
End bp | 679073 |
Gene Length | 1177 bp |
Protein Length | 348 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390057 |
Product | predicted protein |
Protein accession | XP_001384427 |
Protein GI | 150865278 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.301787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTTGTAAAT GTCGTCTTCA GGTTTGCAGA GACGTCGTGG TAACAAGACG GCCTCTTCCG GCGCAAATTC CGGTTCCGGT GGCCGTACTT CGGATTCCTA CGAAGATAAT AACCATACCA AGAACAGCAA TGAAGCTGTT TCTGACCACA AAATCGGGTA CGATTCCCGA GACATTGAGA GTAGAGAATC GTTGAAATTG CCACTTTTGA CGCTTATGGA GGAAGTCTTG TTGATCGGAT TGAAGGACAA AGAGGGTTAT CTTTCTTTTT GGAATGACAA CATTTCCTAC GCTTTGAGAG GATGTATTTT GCTTGAATTA GCCTTCCGCT ACAAGATTAC TTTGGTCAAC GATCCCGCAA GACGTCGTTT CGAGTTGAGC GATCGTCTTA TCGAGGTCAT TGACTCCGAG CCAACTGGCG AAGTGTTGTT GGATGAAGCT CTCAAGATCA TGAAGAACGA TGGCTCCAAC TTGTCGGTGA CAAACTGGAT CGATTTGTTA AGTGGAGAGA CATGGAACTT GATGAAAATC AACTACCAGT TGAAACAAGT TAGAGAGCGT TTGGCTAAAG GATTGGTAGA CAAAGGAATC TTAAGGACTG AGAGAAAGAA CTTCTTCTTG TTCGACATGG CTACCCATCC TGTTGCCGAC AAGTTGCTGA AGGAACATAT CAAGAACAGA CTCTTGAACG TATTAGTCAA CAGAAATGTC GATTTGGACA CCGTAGCTAA TGACCAATTT CCTCAGAACA CGTCGTTCCG TTACTTGAGA ACGATTGCCT TGGTCTGTGG AGCGTACGCT GCCAATGTGT TGGAGAATGT GTTGTTGTCG TTGAACTACG ACAAGCGCGA CCAGGCCTTT GCCAGAGCCG ATGAGTTGCT CACAGACTTC CTGGATTTCC CCTTCAACTT GTCGCATCAG AGTCCTTTGG GTATAGGCTT GAACTTGGGC CAGGAAATTA CCTCGGAAGT AGAAGCCAGC TCAAGTAGTG AGTTGCAGTT GGAGTTGATC GCTGCCGTCT TGAGCGTGTT CGCTAGGATG GACTCCATCT TGTGAACCAC GTCATATTCT GTATTGTCAT CTTCTGACAT TATATATAGT CCACATCATC TACACACTCT TCAATTCAGC ACCTTCTTTC GTCCTATTTA GATACTTAGT GCAAGACATA TATCTGG
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Protein sequence | MSSSGLQRRR GNKTASSGAN SGSGGRTSDS YEDNNHTKNS NEAVSDHKIG YDSRDIESRE SLKLPLLTLM EEVLLIGLKD KEGYLSFWND NISYALRGCI LLELAFRYKI TLVNDPARRR FELSDRLIEV IDSEPTGEVL LDEALKIMKN DGSNLSVTNW IDLLSGETWN LMKINYQLKQ VRERLAKGLV DKGILRTERK NFFLFDMATH PVADKLSKEH IKNRLLNVLV NRNVDLDTVA NDQFPQNTSF RYLRTIALVC GAYAANVLEN VLLSLNYDKR DQAFARADEL LTDFSDFPFN LSHQSPLGIG LNLGQEITSE VEASSSSELQ LELIAAVLSV FARMDSIL
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