Gene PICST_67079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67079 
Symbol 
ID4836843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2207919 
End bp2208897 
Gene Length979 bp 
Protein Length276 aa 
Translation table12 
GC content40% 
IMG OID640388158 
Productpredicted protein 
Protein accessionXP_001382650 
Protein GI150863987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.238977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGCATGTCCA CTTCTAGTTT CGTCAAGAAG TTAGCCTCCA ATGACCGTCC CACTAGAGAT 
GCGGCTTTGG AGGCTCTCAG AAAATTTTTG TCTTCCAAAT CTACCAAGTC TATGAGCTTA
TTGGATATGG AGAAGTTATG GAAGGGTCTT TACTTCTCCA TGTGGTTCTG TGATAGACCC
AAGGCCCAGG AAAGACTTGC AGAAAACTTG GGTTCATTAT ACTCTCAAGT AATTTTGAAA
GACGATTTTG CCAAGTTTGT TGAAGCTTTC TGGTCTATTA TGATTAAAGA ATGGCCCTCA
ATAGACCAAT GGAGAATCGA CAAATACTAC TTATTGATCA GAAGAGTAGT TAGACATAAC
TTTCAGTTTA TGCAGAGCAC AGAATGGGAT AGTGAAATAT TGCAGAAATG GCTCGACGTC
ATGAACAGAA CCGTTTTAAG TGGAGACAAG TCTGTTCCTG TAGCTTTACC ATACCATTTG
TGTGATATCT GGGTGGAAGA GTTGGAAAGA GTTCTCTTTG AAGACTTGAA GGATTTACAA
CTGGAATTGG ACGAGTTGAG TAAAGAAGAT GAAGACTATA TTACCAAGTA CCTGGAGTTA
TTGAAACGTA AAGTTGAAAT TGCCCTGGAA GCGCCTATAA CGGAGCTCAT CTCACCGTTT
ACTAGATTAA ACAAAGAAGC ATTGTTGAAG ACTTTGAGAG AAAAGTGCAA AGAAGACGTT
TTGGATGACG AGAGATTAAA GGACTGGGGA TCTGTGGAAG GAGATGAAGA AGAAGAGGAG
GAGGAGGATG ACGACGACGA AGATGCCAGT GAAGAGGAAT GGACAGGATT TTGAGAATTC
TATCAAACTA GAATTTAACT AGAAAAAGGG AAACACCTCT CAAGCCTCAC AATCATATAT
CGGGATATTT TCCCAGCATA GCATTACTAC ACAGAAGTAG ATTCATAGAA TTAATGTATA
ATTAGGAATA ATAGAACTG
 
Protein sequence
MSTSSFVKKL ASNDRPTRDA ALEALRKFLS SKSTKSMSLL DMEKLWKGLY FSMWFCDRPK 
AQERLAENLG SLYSQVILKD DFAKFVEAFW SIMIKEWPSI DQWRIDKYYL LIRRVVRHNF
QFMQSTEWDS EILQKWLDVM NRTVLSGDKS VPVALPYHLC DIWVEELERV LFEDLKDLQS
ELDELSKEDE DYITKYSELL KRKVEIASEA PITELISPFT RLNKEALLKT LREKCKEDVL
DDERLKDWGS VEGDEEEEEE EDDDDEDASE EEWTGF