| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66746 |
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| Symbol | CSM1 |
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| ID | 4852042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3480360 |
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| End bp | 3481714 |
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| Gene Length | 1355 bp |
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| Protein Length | 333 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393750 |
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| Product | CSM1-like protein |
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| Protein accession | XP_001387000 |
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| Protein GI | 126276407 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATCTCCAGA ACATTGTGCA TACTACATCA AGAAATGGAA TTTCGAATCC AAATAAAGAA
ATCCAATCCT TCGATAAAGG TTTGAGTTTT ATAGCACTGT ATTCGCAAAA GGGCTCGTTT
AGTAAATCTT TGGTGTCATA CTGTTACACT GCAATAACGA TCTCCTTGTA ATTCCAATCT
CACAATTGTA TTTTGAATTC GTTTTTCAAT CTTCACTTGT TGATCAACGC GTCCGATAAA
TTCAACAACG AACAACATCC GTTTGATTTC ATGTTAGTGT AGTAATTCAG ATATTTCAAA
TATGGCTCCC AAAACTCGTA AAACTGTCCA GAAAGTGAAA CCCGCTCCTG TGGAAGAAGT
TCCCCACCCG AGAGTACGTA AGGTCTCAGC TAAGGTGTTG GAAAGTATGA CAGATGTATC
AGCATCAACT CCCTCAATGA AGAAAAAGAA CCCCAGCTCA CCATCAACTT CAAAAAGATC
ATCTTCATCT TCGTCAGCAG CAGTTTCGGC ATTAAGCAAG AAATTGAAGG CTTCCAACCC
CATAATAACA GAGCAGGACA TTGTTTCTGC TGAAAACGGC CAGGAACTTA TAGAGCTCAT
AAACGGACTA GTGAACACCA AACAGGACGA GACGTTCGCC AAATACAAAT CCAAGGTTCA
GAACCAGCTA AATAATGACC ACCAAGTAAT ACAAGAGTTG AATGCCGATT TGCTCCAGCG
CCAGGAAACC ATCAACGGCT TGCTCCAAGA GATAAAGCAG CTCAAGAACG AGGTTAGAAC
ATATTCCTCA TCTAATTCGG CAAGTATGAC GGTCGACGGC TCTCTTGATG AAAGCAAGGA
GTTTGTCTAT GAATCTCCCA TCAGAAAGAA GATCAACAAG AAAATCAAGA ACAGCGATAC
ATTGATTAGC CAGGACCAAC TATCCAAAGA ACTAGAAAAT ATAGGTTTCA CTTTAGACAT
GTTGGAACTT TTAACTGGTT TGAGAATTGT CAACTTCGAA GAAGATGAGT CCAAGTATTT
CTTTGATGTA AAACAGTCTG GTTCGAATGG CCAAGATGAA ATCTACATCA ACTACCAACT
TGTAATCTCA AAGTCGTTTG CAACTACTGC TGAGATCAAC TACATCCCTA CGTTCTTGGA
AGCATTGGAA AATGATGACG AGGACCAGGA ACAGGTCGAT AACGCTAACC TCTTGAAGGA
AATCCTTCCG GACTACTTGT GTGAGAACTT GTCGTTCCCC TACGATACCT TGTCACAGTT
CTACAGTAAA GTCAACCGAG CGGTCAACAA GAGGACCAAA TGAGAGTATG TACAATAATT
TCTCTATAAA TACACTAATG TACACCAGTT ATAGT
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| Protein sequence | MAPKTRKTVQ KVKPAPVEEV PHPRVRKVSA KVLESMTDVS ASTPSMKKKN PSSPSTSKRS
SSSSSAAVSA LSKKLKASNP IITEQDIVSA ENGQELIELI NGLVNTKQDE TFAKYKSKVQ
NQLNNDHQVI QELNADLLQR QETINGLLQE IKQLKNEVRT YSSSNSASMT VDGSLDESKE
FVYESPIRKK INKKIKNSDT LISQDQLSKE LENIGFTLDM LELLTGLRIV NFEEDESKYF
FDVKQSGSNG QDEIYINYQL VISKSFATTA EINYIPTFLE ALENDDEDQE QVDNANLLKE
ILPDYLCENL SFPYDTLSQF YSKVNRAVNK RTK
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