Gene PICST_65767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65767 
SymbolBGL7 
ID4839223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp786471 
End bp789020 
Gene Length2550 bp 
Protein Length839 aa 
Translation table12 
GC content45% 
IMG OID640390538 
Productbeta-glucosidase 
Protein accessionXP_001385159 
Protein GI126137271 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.893568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTA GAAGGTTTGA CATAGAGGAA GTTCTTGCTG AGCTCACCTT GGAAGAAAGA 
ATCAGTTTAT TGGCTGGTCT TGACTTCTGG CATACTGTGA GTGTTCCAAG AGTGGGAATT
CCAAGTCTTC GTTTCAGTGA TGGACCCAAT GGTTTGAGAG GGACCAAGTT TTTCGATTCA
GTTCCATCAG CCTGTTTCCC TTGTGGAACT GGATTGGCTG CTACTTTCGA CAAGGAATTG
CTCTTCGAAG CTGGTCAACT CATGGGAGAA GAAGCCAAAC ACAAAGGTGC CCACGTGATA
TTGGGCCCTA CCATGAATAT GCAAAGAGGT CCTCTTGGAG GTAGAGGGTT TGAATCCTTC
AGTGAAGATC CACATTTGAC CGGTCAAGCT GCTTCGTCGA TTATCCGTGG GATCCAAGAT
AAAGGAATCG CTGCCACGGT CAAACACTTT GTATGCAACG ATTTGGAAGA TCAAAGAAAT
TCTAGTAACT CTATCTTAAC AGAAAGAGCT TTGCGCGAAA TCTACTTGGA GCCTTTCAGA
CTCGCTATCA AATATGCTAA CCCCATCTGT GTCATGACTT CATACAATAA GGTCAATGGT
GAGCATGTTT CACAGTCAAA GAGGCTTCTT GAAGAAGTTC TCAGACAAGA ATGGAAATGG
GACGGCTGTA TCATGTCTGA TTGGTACGGA GTCTACACTG CCAACAACGC AATTGAAAAC
GGGTTGGATC TCGAAATGCC TGGACCTCCC AACTTCAGAA AGTTGACCGA AATCAGATCT
ATGGTTGTTA CCAAGGAATT GCATATTAAG CACATAGATG AGAGAGTCAG AGGAGTTCTC
AAACTCATCA AATATGCTCT TCAGTCTGGT ATTCCAGAGA ATGCCCCAGA AGACACATTA
AATAATACGC CAGAAACCAG AAAACTCTTG CGTAAACTTG CACATGACTC TGTGGTATTG
CTTAAAAACG AAGACAATCT CTTGCCTCTC AGCAAAGACG AGAAGATCGT TGTCATTGGT
CCAAATGCCA AATATGCTGC GTACTGTGGA GGTGGCTCTG CTTCGCTCAG AGCCTACTAC
ACTACGACTC CTTACGATTC AATTGCGGCT AAGACATCTA CTCCTATAGA TTACACTGTG
GGAGCCTATG GTCATAGATT GCTTCCCGGC TTGGCTGCAA ACTTAGTGAA TCCCATCACA
GGAAAGCCAG GTTACAACTG TAAATTCTAC CGTGAAACCG TGGGCTCTCC GGAAAGAACT
TTGATCGACG AATACAATCT CGACATATCC TATATCTTGC TTGTGGACTA TTATAACGAC
TTGGCTCCAG ACTCGGTCTT CTTTGTAGAT TTCGAAGGTG AGTTCACTCC AGACGAAACT
GCAGAATACG AATTCGGTGC TTCAGTTCAG GGAACAGCCT TGATTTACGT AGATAACAAG
TTAGTAGTTG ACAACAAGAC CAAGCAGAGA AGAGGAAACT CGTTCTTCAA CTCTGGTTCT
GCTGAAGAAA AAGGCACTCT TCTCTTGGAA AAGGGCAAGA CCTACAAGGT GCGAATCGAG
TTCGGGTCTG GTCCAACCTT CACGTGTAGA CAGGAAGGTT CTACAGTGGT AGCTGGAGGT
GGTGGTATTA ACTTGGGTAT GGCCAAGGTG ATTGATCCTG AAATTGAGAT CCACAAGGCT
GCCAAATTGG CAAAAGAAGC TGACAAAGTT GTGTTGAACA TTGGCTTAAA TCAGGAATGG
GAGGCTGAAG GTTTTGACAG ACCAGATATG GAGTTGGTTG GCTACCAAAA CAAGTTGATC
GACGCTGTCT TGGCTGCTAA CCCGAACACT GTAATTGTTA ACCAGTCTGG AACTCCTGTA
GAAATGCCGT GGTTGCCCAA GGCTAAGGCT GTACTCCAGG CTTGGTATGG AGGTAATGAA
TCCGGCAATG GTATCGCAGA TGTACTCTTT GGTGACGTTA ACCCCAGCGG TAAATTGTCG
TTGACGTTCC CCTTCAAAAC CATCGATAAT CCTACCTATT TGAACTTCAA GACTGAAAGA
GGAAGAGTTC TCTACAACGA AGACATCTTT GTAGGCTACA GATTCTACGA AAAGATGGGC
CGTGACGTAG CCTTCCCCTT TGGCTTCGGA TTGTCGTACA CCAACTTCGA GTTTGCAGAT
GTAAACGTAG TAGTTGAAGA ATTGGACGAC AACTTGGAGG TTTCTGTCAC AGTAAGCAAC
ACTGGTAAGG TAGACGGTGC TGAGGTGGTT CAAATCTACA TCGGTAAGGA AGATTCTGAT
GTCATCAGAC CTGTGAAGGA GTTGAAGGGT TTCGAAAAAG TATTCTTGAA GGCAGGCACT
CAAGAAACTG TTATCTCAAC TTTGTCATTG AAGGAGTCAG TATCTTTCTT TGACGAATAT
CAAGAAAAGT GGTCAGTGCT TGCTGGTGAA TACCAAGTGT ATGTAGGCAA CAGTAGTGAC
AATGCCAACG CCATTGGCAC CTTTGTCATT GAACGGGACT TCCTCTGGAT TGGCCGTTAG
AGGTTTTGAT AGAATAAAAA CTTATATCGT
 
Protein sequence
MTSRRFDIEE VLAELTLEER ISLLAGLDFW HTVSVPRVGI PSLRFSDGPN GLRGTKFFDS 
VPSACFPCGT GLAATFDKEL LFEAGQLMGE EAKHKGAHVI LGPTMNMQRG PLGGRGFESF
SEDPHLTGQA ASSIIRGIQD KGIAATVKHF VCNDLEDQRN SSNSILTERA LREIYLEPFR
LAIKYANPIC VMTSYNKVNG EHVSQSKRLL EEVLRQEWKW DGCIMSDWYG VYTANNAIEN
GLDLEMPGPP NFRKLTEIRS MVVTKELHIK HIDERVRGVL KLIKYALQSG IPENAPEDTL
NNTPETRKLL RKLAHDSVVL LKNEDNLLPL SKDEKIVVIG PNAKYAAYCG GGSASLRAYY
TTTPYDSIAA KTSTPIDYTV GAYGHRLLPG LAANLVNPIT GKPGYNCKFY RETVGSPERT
LIDEYNLDIS YILLVDYYND LAPDSVFFVD FEGEFTPDET AEYEFGASVQ GTALIYVDNK
LVVDNKTKQR RGNSFFNSGS AEEKGTLLLE KGKTYKVRIE FGSGPTFTCR QEGSTVVAGG
GGINLGMAKV IDPEIEIHKA AKLAKEADKV VLNIGLNQEW EAEGFDRPDM ELVGYQNKLI
DAVLAANPNT VIVNQSGTPV EMPWLPKAKA VLQAWYGGNE SGNGIADVLF GDVNPSGKLS
LTFPFKTIDN PTYLNFKTER GRVLYNEDIF VGYRFYEKMG RDVAFPFGFG LSYTNFEFAD
VNVVVEELDD NLEVSVTVSN TGKVDGAEVV QIYIGKEDSD VIRPVKELKG FEKVFLKAGT
QETVISTLSL KESVSFFDEY QEKWSVLAGE YQVYVGNSSD NANAIGTFVI ERDFLWIGR