| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64503 |
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| Symbol | |
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| ID | 4841038 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 91497 |
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| End bp | 95012 |
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| Gene Length | 3516 bp |
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| Protein Length | 1046 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392353 |
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| Product | predicted protein |
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| Protein accession | XP_001386415 |
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| Protein GI | 150866727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5113] Ubiquitin fusion degradation protein 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTG CGGACGAGGT ATGTATTTAG TAGTGGCAAA ATGCGGTTGA AAGCATCAGA
ATCATATCAA TTCATATTAA TGCCAATCAG ATCAACTGGC AGAAACCAAA TTGGTAAATA
AAATTTAAAA GTATCGAAGG AATTCGTGTG TTCCCAAAGT CCGTGAATGC AATATTATAA
AAATACTTCG GAATAGATCT AGATGAATAC TTCAGATATG TCAGTTTCAA ACATTGTCAA
TGTGAATTCA CAACTATCAT CCAAGACGGT GGTTGGCAGA TGTGTTCTGC TTCATATTAT
CTTGCAATTT GTATATGAAT GATTTGTCAT ATAGTGATAT GATTTCTCTT GATTCAACGT
CGCTACAGAA TTCTTACTAA CAATTCCTTC CAGATCAGAG CCAAGCGTTT GGCCAAATTG
TCAGCGCAGC CTTCGGCAGT CAATAATGGC GATCTGCCCA AAGCATCTAC TCATGCAGAT
TCAGCATCAA TACAAACTTC AAACCCAGCA CCAGCAGCTG CTCCAAAGCC AGTTGCAATC
CCAAAACAGC CTGTAGTGGT TCCACCTAAA GCTCCTAAAG AAATTGTAAC GCTTACTGAA
GAAGAACAGC TTGCTGAATG GATGAAGCTT GAAATCGAAA ATATCTTTCA AGTTACCATC
AACCCACAAC ATAACAACAA AAGCTTGGTC TATTTAGCCA CTTTGGTTTC GGACCTCGCT
CTGTCGCAGA AATTGTTGGG TCCATCCGAT CTTGAAGCCA TTTTTATGGA AGTCTTGACG
GACTTGGGAG TTCCTTCTCC AAACAAAAGC CCTATTGAAT ATCTCTACAA TGTTTATCAT
AAAGCATATG GTACCAAGAG AATATTGCCC GTTAAATCAC CTTTATACAA CTCCAAAATT
GCCATTATCA ATGAAATCAT TAGGTTGTCA GTTTCGTATG GACTGATCAG TTTTCAGATA
CCAGACATGT TCCTTAACAA CGACCTTGCA TCTTCCATTC AACTATTTAT CAGGAGAGGT
CATGACTTAA CTCCTTTCTT GATAGACATC ATTCACTCCA GCATCGAACA GGACTGCCTC
TTAGATATCT TGAACATCAT CTTGCCTACT TTGAGCGTCC AGTTGTATTC AAGTAATTTA
CACGACAGAA CTTATGCGAA CACTCTCTTG TTGTTTGAGT CTTTGGTCAA TATCAAACCA
GTAGCAGCAG TATTCTCGCA GGTTGAAGGT TTCCAGCCTC CTTCTCGCGA AAATGCTTTA
GATTTCGAGC ACAAGACGAT ATTGGGTTCT ATATTGAGAT TGTCACCACT TGATGAAAAG
GTTAGTATGT CATTGTTTGC TTCTGACCCA AGTCCTATTC AGTTGAATGG GCTTATGGAA
TCGATGCAAA ATGAGTACAA GGTGTTGATT GAGCGTCTTT TTTACATTGT AGATAAGTTG
ATCCGTGGGT CGGCTGAAAC TCGTGAAGCG TTGTTAATTT GGTTTTCTGA GTTGATTAAT
TTAAGTCATT TGAGAAGAGG AAGTCATGCC GATTACGCCA AACTTCCTTC GGATGCCATC
ATGTACAACA TCTCTATTAT TCTCATCAAG TTGAGTTTGC CATTTCTAGA TTATCCTACC
TTTTCCAAGA TAGAGAAGAT CGATGTCGAT TACTTTTCTA AGAGCAAATT GCTTAACATT
ACTGAAGAAT CCAGAGTTAA CTCGAGCATT GCTGAGGCCG ACGAGTACTA TAAGGAAAAG
AGCGAATTAA TCTCTCCCAA CTTCATATCA ACGTGTTTTA ATTTGACGTT GACGTATTTG
CATTATGGAA TGGGTGGTAT CTATATTCAC TACGATAGAT TGAAGAACAC AGTTAAACAA
CTCAACGAGA GAATAGCCAT GATTAACTCA CCTGTCTCAC CTCCAGGAGT CAATCCAATG
CAGCTCCAGT TCATGAGACA GCAGCTACCA GCATTACAAA AGAGTGTTCA TAAGCTGAAA
GCTACTATGC ATGCGATTAC AGCTCTTTTC AGCTTCAGAC CTTTGCAACT AGAAGTGTTC
GACTTCGTTG TTGGGGCCTG TACTTTTATT ACAAAATTAA TTGATCCTTC ACACACTTAT
CCAAAGTCAA GATTGCTGAT TCCAATCTTC AAGATTGACA AGGTTTCTCA ATTGGACGAT
CACGATTTCT TGAAGACTAA AACACCAGAG CCTTGGAAGT ATTATCCTGA GTATATCTTG
GAAGGCATTA TTAACTATTG TAAGTTTTCT GTGAACTTCC GTGGGTGTCC ATTAGTGTTG
AACGATGTCA AATTACGTTT GTTTGTGGAG TTTGCAATCG TTCTTTTGAG GTGTCCGGAG
TTGATAGGTA ATCCTCACAT GAAGGCTAAT CTTGTAGAAT TATTATATAT TGGTGTAATT
GATGGTGACC GTGGCTTCAT CACACCAATC CTTTCTGAAA ACAAGTTGGT CATGGACAAC
ATCTTATATT CGTTGTTGGA TTTTTATGTC ATGGTAGAAA AAACTGGAGC TCACACTCAG
TTCTACGACA AGTTTAACAG TCGTTATTAT ATTTCTGTCA TCATTGAGCA GTTGTGGAAG
AATCCTATCT ATCGTGGACA GTTGACCGAC TACTCTAAAC ACAATGTGGA TTTCTTCATC
AGATTCATTG CCAGAATGTT GAACGATACG ACGTTTCTTT TAGACGAGAC ATTCAATGAG
TTGGAAAAAA TCCATGATTG CCAAGTTGAA TTGAAGAATA GACAACAGGG TCAAACCAAT
GAAGAATTAG GTACCGATGA AGAACTTTCT AACAAGTTGA CAAGTGCAGA AAGAACAGCC
AAGTCTTATA TGGGCTTGAC CACTAAGACA ATGCAATTGT TCAAATTGTT TACCAAAGAA
GTTCCTCAAG GGTTTGTGTT GCCTGAGATT GTAGACAGAT TGGCAGGCAT GTTGGACTAC
AACTTGTCTG CTATGGTTGG ACCAAAATGT TCGAATTTGA AGGTTGAAGC ACCAGAGTCT
TATGGGTTTG AACCCAAGAA GACTTTGGCT GATTTGTGTG AGATCTATTC AAATTTGGCC
AATCAAAATA AGTTCGTAGT GGCTGTCTCT CGAGATGGTA GATCTTTCAA TTTGGCTTAT
TTTGAAAAGG CAGAACAGAT CTTGACTACA AAGACATATG TCGACCCAAA GATTATCAAG
ACGCTTATCA ACTTTGCGAA AAGGGCAGAA ATACAAAGAC AGGAAGATGA GGATGAAGAA
ATGGAGTTGG GAGAAGTTCC CGACGAGTTC TTGGATCCTT TGATGTACAC AGTGATGGAA
GATCCTGTAG TTTTACCCAC TTCCAAAATT AGTATCGATA GGTCTACGAT CAAGGCACAT
TTGTTGAGTG ATCCTACTGA TCCTTTCAAC AGAATGCCTT TGAAGATGGA AGACGTAGTG
GATGATGTGG AGTTGAAGGA GAAGATTCTT GCCTTCAAGA GAGACAAAAA AGCAGAACGG
ATAGCAGCTA AGTCTGACGA TATGGATGTT ACTTAA
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| Protein sequence | MSSADEIRAK RLAKLSAQPS AVNNGDSPKA STHADSASIQ TSNPAPAAAP KPVAIPKQPV
VVPPKAPKEI VTLTEEEQLA EWMKLEIENI FQVTINPQHN NKSLVYLATL VSDLASSQKL
LGPSDLEAIF MEVLTDLGVP SPNKSPIEYL YNVYHKAYGT KRILPVKSPL YNSKIAIINE
IIRLSVSYGS ISFQIPDMFL NNDLASSIQL FIRRGHDLTP FLIDIIHSSI EQDCLLDILN
IILPTLSVQL YSSNLHDRTY ANTLLLFESL VNIKPVAAVF SQVEGFQPPS RENALDFEHK
TILGSILRLS PLDEKVSMSL FASDPSPIQL NGLMESMQNE YKVLIERLFY IVDKLIRGSA
ETREALLIWF SELINLSHLR RGSHADYAKL PSDAIMYNIS IILIKLSLPF LDYPTFSKIE
KIDVDYFSKS KLLNITEESR VNSSIAEADE YYKEKSELIS PNFISTCFNL TLTYLHYGMG
GIYIHYDRLK NTVKQLNERI AMINSPVSPP GVNPMQLQFM RQQLPALQKS VHKSKATMHA
ITALFSFRPL QLEVFDFVVG ACTFITKLID PSHTYPKSRL SIPIFKIDKV SQLDDHDFLK
TKTPEPWKYY PEYILEGIIN YCKFSVNFRG CPLVLNDVKL RLFVEFAIVL LRCPELIGNP
HMKANLVELL YIGVIDGDRG FITPILSENK LVMDNILYSL LDFYVMVEKT GAHTQFYDKF
NSRYYISVII EQLWKNPIYR GQLTDYSKHN VDFFIRFIAR MLNDTTFLLD ETFNELEKIH
DCQVELKNRQ QGQTNEELGT DEELSNKLTS AERTAKSYMG LTTKTMQLFK LFTKEVPQGF
VLPEIVDRLA GMLDYNLSAM VGPKCSNLKV EAPESYGFEP KKTLADLCEI YSNLANQNKF
VVAVSRDGRS FNLAYFEKAE QILTTKTYVD PKIIKTLINF AKRAEIQRQE DEDEEMELGE
VPDEFLDPLM YTVMEDPVVL PTSKISIDRS TIKAHLLSDP TDPFNRMPLK MEDVVDDVEL
KEKILAFKRD KKAERIAAKS DDMDVT
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