Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64492 |
Symbol | HYR5.5 |
ID | 4841022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 947009 |
End bp | 948154 |
Gene Length | 1146 bp |
Protein Length | 382 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392337 |
Product | hyphally regulated cell wall protein |
Protein accession | XP_001386602 |
Protein GI | 150866866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT TGCGACTATT ATTTGTCGCA TTTCTTGCCA TTCTCGCGTT AGTGTCTTCA CTGGAAATTT CTCAAAACAC AATAGACAGA GGTTTTGTTC AGATAAATAC TGGAGATTAT ACGATTGATA ATGGTATAAC ATGGTCCATT ATCGATGTCA CCAGTGTAAC ATTGACGGAT GGTTTGACCG TCGGAACTGG GGCTCTGTTC TATGTATCCA CCTCTGCTTC TCTCTTGGGA TTGTCTGTAA GCATCGCTCT TAATCCGATA CTTGGACCCG CAAACGATGT GATAGTGAAT AACGGTCTAA TTTCGTTGAA TGGGGCTTCT TCGCTTCTCA CATCATCTTT CCAATTTGGA GGTGCATCAT TTACCAACAC GGGCCAGGTT TATATGGGTG TCTCTGGTGG GAGTTTAATT GGCTCCACCA TGTCTATATC AACCAATACC ATCCAAAATA CGGGTTTAAT TGTATACTAC CAGGCTCAAC CAGGTTCGGC TAATATTAAC ATCGGAGCCT CAGGACTGGC TGTCACCAAC AACGGTCAAA TTTGTCTTTA CAATGCCCAC TACTCTCAGA ATGCAAACAT TCTAGGCACT GGCTGCATCA CCCTTGATGC TGATTCTGAA CTCGATGTCA AAGTTGGGTC AAGTTCATTT GCTAGTACGC AAATTATCTA CATGACACCT CAATCTACCA TTGGAATCCC TACTTTTGCA TCTGGGAGTA TCACCATTAA CGGTTTTGGT GGAGGGAACA CTATTACTAT CAACATTCCC CTTGCCTTGT ATTCTCAGTC GTACTCACAA ACTACAGGTA CTTTAACAAT TAGAAATATA TTAACCTCCG CTTCAATTCA ACTTGTTATA GGTTCTGGTT ACATTTCTAA CTCGTTTACT TTCAGTGCTG GACTTCTTGG TTTGTCGGTC ACCTACAGTG GCAATCCTCC CAATCCCATT TCCAGTCTTT GTGCTACGGG TTGTGGAGTT TTACCTGTAG CTCCAGGTGA TGAGCCAACG GAATACACCA CAGTCGTTAC AACAACGAAT AGTAATGCTC AAACAACTAC CGGCACATAT GACGTGCTCA TCTCCAACAC TGTAATTGGA ACTAGCATCA GCTGGTATAC TAGTTCCTCT TTGATT
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Protein sequence | MKILRLLFVA FLAILALVSS SEISQNTIDR GFVQINTGDY TIDNGITWSI IDVTSVTLTD GLTVGTGASF YVSTSASLLG LSVSIALNPI LGPANDVIVN NGLISLNGAS SLLTSSFQFG GASFTNTGQV YMGVSGGSLI GSTMSISTNT IQNTGLIVYY QAQPGSANIN IGASGSAVTN NGQICLYNAH YSQNANILGT GCITLDADSE LDVKVGSSSF ASTQIIYMTP QSTIGIPTFA SGSITINGFG GGNTITINIP LALYSQSYSQ TTGTLTIRNI LTSASIQLVI GSGYISNSFT FSAGLLGLSV TYSGNPPNPI SSLCATGCGV LPVAPGDEPT EYTTVVTTTN SNAQTTTGTY DVLISNTVIG TSISWYTSSS LI
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