Gene PICST_64492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64492 
SymbolHYR5.5 
ID4841022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp947009 
End bp948154 
Gene Length1146 bp 
Protein Length382 aa 
Translation table12 
GC content42% 
IMG OID640392337 
Producthyphally regulated cell wall protein 
Protein accessionXP_001386602 
Protein GI150866866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT TGCGACTATT ATTTGTCGCA TTTCTTGCCA TTCTCGCGTT AGTGTCTTCA 
CTGGAAATTT CTCAAAACAC AATAGACAGA GGTTTTGTTC AGATAAATAC TGGAGATTAT
ACGATTGATA ATGGTATAAC ATGGTCCATT ATCGATGTCA CCAGTGTAAC ATTGACGGAT
GGTTTGACCG TCGGAACTGG GGCTCTGTTC TATGTATCCA CCTCTGCTTC TCTCTTGGGA
TTGTCTGTAA GCATCGCTCT TAATCCGATA CTTGGACCCG CAAACGATGT GATAGTGAAT
AACGGTCTAA TTTCGTTGAA TGGGGCTTCT TCGCTTCTCA CATCATCTTT CCAATTTGGA
GGTGCATCAT TTACCAACAC GGGCCAGGTT TATATGGGTG TCTCTGGTGG GAGTTTAATT
GGCTCCACCA TGTCTATATC AACCAATACC ATCCAAAATA CGGGTTTAAT TGTATACTAC
CAGGCTCAAC CAGGTTCGGC TAATATTAAC ATCGGAGCCT CAGGACTGGC TGTCACCAAC
AACGGTCAAA TTTGTCTTTA CAATGCCCAC TACTCTCAGA ATGCAAACAT TCTAGGCACT
GGCTGCATCA CCCTTGATGC TGATTCTGAA CTCGATGTCA AAGTTGGGTC AAGTTCATTT
GCTAGTACGC AAATTATCTA CATGACACCT CAATCTACCA TTGGAATCCC TACTTTTGCA
TCTGGGAGTA TCACCATTAA CGGTTTTGGT GGAGGGAACA CTATTACTAT CAACATTCCC
CTTGCCTTGT ATTCTCAGTC GTACTCACAA ACTACAGGTA CTTTAACAAT TAGAAATATA
TTAACCTCCG CTTCAATTCA ACTTGTTATA GGTTCTGGTT ACATTTCTAA CTCGTTTACT
TTCAGTGCTG GACTTCTTGG TTTGTCGGTC ACCTACAGTG GCAATCCTCC CAATCCCATT
TCCAGTCTTT GTGCTACGGG TTGTGGAGTT TTACCTGTAG CTCCAGGTGA TGAGCCAACG
GAATACACCA CAGTCGTTAC AACAACGAAT AGTAATGCTC AAACAACTAC CGGCACATAT
GACGTGCTCA TCTCCAACAC TGTAATTGGA ACTAGCATCA GCTGGTATAC TAGTTCCTCT
TTGATT
 
Protein sequence
MKILRLLFVA FLAILALVSS SEISQNTIDR GFVQINTGDY TIDNGITWSI IDVTSVTLTD 
GLTVGTGASF YVSTSASLLG LSVSIALNPI LGPANDVIVN NGLISLNGAS SLLTSSFQFG
GASFTNTGQV YMGVSGGSLI GSTMSISTNT IQNTGLIVYY QAQPGSANIN IGASGSAVTN
NGQICLYNAH YSQNANILGT GCITLDADSE LDVKVGSSSF ASTQIIYMTP QSTIGIPTFA
SGSITINGFG GGNTITINIP LALYSQSYSQ TTGTLTIRNI LTSASIQLVI GSGYISNSFT
FSAGLLGLSV TYSGNPPNPI SSLCATGCGV LPVAPGDEPT EYTTVVTTTN SNAQTTTGTY
DVLISNTVIG TSISWYTSSS LI